RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
DDX39A-211ENST00000590239 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
DDX39A-211ENST00000590239 FTHL17Q9BXU8 183 aa16.5■□□□□ 0.23
DDX39A-211ENST00000590239 PPP1R12CQ9BZL4 782 aa16.5■□□□□ 0.23
DDX39A-211ENST00000590239 TMX1Q9H3N1 280 aa16.5■□□□□ 0.23
DDX39A-211ENST00000590239 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
DDX39A-211ENST00000590239 STAG3L1P0CL83 205 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 SKIP12755 728 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 VAMP7P51809 220 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 COPB1P53618 953 aaKnown RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 BFSP1Q12934 665 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 PSMD6Q15008 389 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 SURF1Q15526 300 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 BRSK2Q8IWQ3 736 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 SEPT8Q92599 483 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 APBB2Q92870 758 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 TRIM6Q9C030 488 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 TANC1Q9C0D5 1861 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 TAB2Q9NYJ8 693 aa16.49■□□□□ 0.23
DDX39A-211ENST00000590239 RBAKQ9NYW8 714 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-211ENST00000590239 A0A1B0GTH6 734 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 TRIM43BA6NCK2 446 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 CBFA2T2O43439 604 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 STX10O60499 249 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 RAB27AP51159 221 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 CCL23P55773 120 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 UBASH3AP57075 661 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
DDX39A-211ENST00000590239 VWA3BQ502W6 1294 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 HACE1Q8IYU2 909 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 TRIM43Q96BQ3 446 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-211ENST00000590239 ADAM2Q99965 735 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
DDX39A-211ENST00000590239 PRDM5Q9NQX1 630 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-211ENST00000590239 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
DDX39A-211ENST00000590239 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 AP5Z1O43299 807 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 MGEA5O60502 916 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 ZNF623O75123 536 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 IL18RAPO95256 599 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 TPM3P06753 285 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 RAG1P15918 1043 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 TNFSF9P41273 254 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 CLDN10P78369 228 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 PLCB2Q00722 1185 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 MIIPQ5JXC2 388 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
DDX39A-211ENST00000590239 CD302Q8IX05 232 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 CEP120Q8N960 986 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 SCLYQ96I15 445 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 ACAP3Q96P50 834 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 TRIM5Q9C035 493 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 VPS16Q9H269 839 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 NDST4Q9H3R1 872 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
DDX39A-211ENST00000590239 RGS18Q9NS28 235 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 C1orf112Q9NSG2 853 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 FAM105AQ9NUU6 356 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 IPPQ9Y573 584 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
DDX39A-211ENST00000590239 A0A0U1RQF3 1178 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 GTF2H1P32780 548 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 YARSP54577 528 aaKnown RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 OSTNP61366 133 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 KCNH2Q12809 1159 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 NR1I3Q14994 352 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 DCAF17Q5H9S7 520 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 MFSD5Q6N075 450 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 TMEM199Q8N511 208 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 SMG8Q8ND04 991 aaKnown RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 DBF4BQ8NFT6 615 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 PLEKHO2Q8TD55 490 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 XPO4Q9C0E2 1151 aaKnown RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 NXF3Q9H4D5 531 aaKnown RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 ASB7Q9H672 318 aa16.46■□□□□ 0.23
DDX39A-211ENST00000590239 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-211ENST00000590239 CUL9Q8IWT3 2517 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 CXCL8P10145 99 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 ZNF75DP51815 510 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 FAM189BP81408 668 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 C1orf220Q5T0J3 134 aa16.45■□□□□ 0.22
DDX39A-211ENST00000590239 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms