RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 COBLL1Q53SF7 1204 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 CCDC183Q5T5S1 534 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 HS2ST1Q7LGA3 356 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 ABI1Q8IZP0 508 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 TRIML1Q8N9V2 468 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 ZSWIM2Q8NEG5 633 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 ZFP42Q96MM3 310 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 GAD1Q99259 594 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 CCDC94Q9BW85 323 aaPredicted RBP20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 GTPBP4Q9BZE4 634 aaKnown RBP20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 CXCL16Q9H2A7 254 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 PCIF1Q9H4Z3 704 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 TYW1Q9NV66 732 aaKnown RBP20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 GIT1Q9Y2X7 761 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 ARL5CA6NH57 179 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 CLIC2O15247 247 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 ARHGEF15O94989 841 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 CD44P16070 742 aaKnown RBP20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 RAB30Q15771 203 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 KLHL40Q2TBA0 621 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 GLB1LQ6UWU2 654 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 RBM43Q6ZSC3 357 aaKnown RBP20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 SP7Q8TDD2 431 aaPredicted RBP20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 SAAL1Q96ER3 474 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 UBN1Q9NPG3 1134 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 HCSTQ9UBK5 93 aa20.7■□□□□ 0.9
CLPTM1-209ENST00000588855 SOX1O00570 391 aaPredicted RBP20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 MEFVO15553 781 aaPredicted RBP20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 CA3P07451 260 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 DNAJB2P25686 324 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 ACOT2P49753 483 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 BTG3Q14201 252 aaPredicted RBP20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 NFKBIBQ15653 356 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 CMTR2Q8IYT2 770 aaKnown RBP20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 ADSSL1Q8N142 457 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 ACAP3Q96P50 834 aa20.69■□□□□ 0.9
CLPTM1-209ENST00000588855 PDXKO00764 312 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CXCL8P10145 99 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 SCNN1GP51170 649 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 SNRPFP62306 86 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 NOMO2Q5JPE7 1267 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 FAM213AQ9BRX8 229 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 NKX2-4Q9H2Z4 354 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 SEMA6BQ9H3T3 888 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 HSPBP1Q9NZL4 362 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CGNQ9P2M7 1197 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 MSRAQ9UJ68 235 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CPSF3Q9UKF6 684 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 GOLGA8IPA6NC78 632 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 GOLGA8JA6NMD2 632 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 INPPL1O15357 1258 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CLTAP09496 248 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CYP2J2P51589 502 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 YARSP54577 528 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 ENOX2Q16206 610 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 CRELD2Q6UXH1 353 aaPredicted RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 LRRC55Q6ZSA7 311 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 C12orf56Q8IXR9 622 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 GSTCDQ8NEC7 633 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 GOLGA5Q8TBA6 731 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 URGCPQ8TCY9 931 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 NOC3LQ8WTT2 800 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 SNX27Q96L92 541 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 TOPORSQ9NS56 1045 aaPredicted RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 MIOSQ9NXC5 875 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 PLAGL2Q9UPG8 496 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 TRAF3IP3Q9Y228 551 aa20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 MRPL42Q9Y6G3 142 aaKnown RBP20.68■□□□□ 0.9
CLPTM1-209ENST00000588855 PPP1R3GB7ZBB8 358 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 PTGESO14684 152 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 POMCP01189 267 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 STIM1Q13586 685 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 KYAT1Q16773 422 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 SLC10A6Q3KNW5 377 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 ZCWPW2Q504Y3 356 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 HABP4Q5JVS0 413 aaKnown RBP20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 KLHL10Q6JEL2 608 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 SPRED2Q7Z698 418 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 LRRC43Q8N309 656 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 FIBCD1Q8N539 461 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 RPS6KC1Q96S38 1066 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 MRPL9Q9BYD2 267 aaKnown RBP20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 TBC1D13Q9NVG8 400 aa20.67■□□□□ 0.9
CLPTM1-209ENST00000588855 LINC01553A4QN01 128 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 KIAA0391O15091 583 aaKnown RBP20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 CALUO43852 315 aaPredicted RBP20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 EXTL3O43909 919 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 NR3C1P04150 777 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 GLRA4Q5JXX5 417 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 ALKAL1Q6UXT8 129 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 GPD1LQ8N335 351 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 TIFAQ96CG3 184 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 RPF1Q9H9Y2 349 aaKnown RBP20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 CDH23Q9H251 3354 aa20.66■□□□□ 0.9
CLPTM1-209ENST00000588855 TRIM49BA6NDI0 452 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 PSMA7O14818 248 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 B4GALT3O60512 393 aa20.65■□□□□ 0.9
CLPTM1-209ENST00000588855 LDHAP00338 332 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms