RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 KCNN1Q92952 543 aa27.33■■□□□ 1.97
TSEN54-209ENST00000583454 APOL5Q9BWW9 433 aa27.33■■□□□ 1.97
TSEN54-209ENST00000583454 ZBP1Q9H171 429 aa27.33■■□□□ 1.97
TSEN54-209ENST00000583454 CUEDC2Q9H467 287 aa27.33■■□□□ 1.97
TSEN54-209ENST00000583454 DENND4AQ7Z401 1863 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 MYMKA6NI61 221 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 TTLL13PA6NNM8 815 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 K7ERI5 159 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 CLASP2O75122 1294 aaKnown RBP27.32■■□□□ 1.96
TSEN54-209ENST00000583454 ZC3H11AO75152 810 aaKnown RBP eCLIP27.32■■□□□ 1.96
TSEN54-209ENST00000583454 EDN1P05305 212 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 KRT18P05783 430 aaKnown RBP27.32■■□□□ 1.96
TSEN54-209ENST00000583454 SRGAP2BP0DMP2 458 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 HOXB8P17481 243 aaPredicted RBP27.32■■□□□ 1.96
TSEN54-209ENST00000583454 CMA1P23946 247 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 SMTNP53814 917 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 PRPF4BQ13523 1007 aaKnown RBP27.32■■□□□ 1.96
TSEN54-209ENST00000583454 NOMO2Q5JPE7 1267 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 GLB1LQ6UWU2 654 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 AGMOQ6ZNB7 445 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 IQUBQ8NA54 791 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 TMEM161BQ8NDZ6 487 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 TMEM169Q96HH4 297 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 VN1R3Q9BXE9 311 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 FAM13BQ9NYF5 915 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 DNAJB4Q9UDY4 337 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 MYO10Q9HD67 2058 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 PHLPP2Q6ZVD8 1323 aa27.32■■□□□ 1.96
TSEN54-209ENST00000583454 SLC16A4O15374 487 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 GALTP07902 379 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 AFF1P51825 1210 aaKnown RBP27.31■■□□□ 1.96
TSEN54-209ENST00000583454 ZXDAP98168 799 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 TRIM67Q6ZTA4 783 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 TAS1R3Q7RTX0 852 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 BMP8AQ7Z5Y6 402 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 DNAJC19Q96DA6 116 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 IGSF21Q96ID5 467 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 EIF2AQ9BY44 585 aaKnown RBP27.31■■□□□ 1.96
TSEN54-209ENST00000583454 PARVGQ9HBI0 331 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 KBTBD4Q9NVX7 518 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 INPP5FQ9Y2H2 1132 aa27.31■■□□□ 1.96
TSEN54-209ENST00000583454 FAM13AO94988 1023 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 NT5DC1Q5TFE4 455 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 SLC27A1Q6PCB7 646 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 ZNF280BQ86YH2 543 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 VPS52Q8N1B4 723 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 SMG8Q8ND04 991 aaKnown RBP27.3■■□□□ 1.96
TSEN54-209ENST00000583454 CNNM3Q8NE01 707 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 AUTS2Q8WXX7 1259 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 DDX12PQ92771 950 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 CASP10Q92851 521 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 PGBD4Q96DM1 585 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 IRAK3Q9Y616 596 aa27.3■■□□□ 1.96
TSEN54-209ENST00000583454 POLR2DO15514 142 aaKnown RBP27.29■■□□□ 1.96
TSEN54-209ENST00000583454 SLC11A1P49279 550 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 NCKAP1LP55160 1127 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 DYMQ7RTS9 669 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 DDX53Q86TM3 631 aaKnown RBP27.29■■□□□ 1.96
TSEN54-209ENST00000583454 MYCT1Q8N699 235 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 DHX58Q96C10 678 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 FBXL18Q96ME1 805 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 KCNH6Q9H252 994 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 PDZD7Q9H5P4 517 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 KCNH3Q9ULD8 1083 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 USP20Q9Y2K6 914 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 IPPQ9Y573 584 aa27.29■■□□□ 1.96
TSEN54-209ENST00000583454 TDRD15B5MCY1 1934 aaKnown RBP27.29■■□□□ 1.96
TSEN54-209ENST00000583454 TMEM221A6NGB7 291 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 M0R296 226 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 N4BP3O15049 544 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 TBCAO75347 108 aaKnown RBP27.28■■□□□ 1.96
TSEN54-209ENST00000583454 CXCL14O95715 111 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 CTSAP10619 480 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 MAPTP10636 758 aaKnown RBP27.28■■□□□ 1.96
TSEN54-209ENST00000583454 LIG1P18858 919 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 SCP2P22307 547 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 CDR2LQ86X02 465 aaPredicted RBP27.28■■□□□ 1.96
TSEN54-209ENST00000583454 FIZ1Q96SL8 496 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 PYM1Q9BRP8 204 aaKnown RBP27.28■■□□□ 1.96
TSEN54-209ENST00000583454 TNMDQ9H2S6 317 aa27.28■■□□□ 1.96
TSEN54-209ENST00000583454 FAM237AA0A1B0GTK4 181 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 H0YCG3 227 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 DDHD2O94830 711 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 HAUS6Q7Z4H7 955 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 MFSD14AQ96MC6 490 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 ADAM7Q9H2U9 754 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 GDPD2Q9HCC8 539 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 TNFSF13BQ9Y275 285 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 C2orf16Q68DN1 1984 aa27.27■■□□□ 1.96
TSEN54-209ENST00000583454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.26■■□□□ 1.95
TSEN54-209ENST00000583454 A0A1W2PQ27 194 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 A0A1W2PQ64 194 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 A0A1W2PQD8 194 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 CARNS1A5YM72 827 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 TRAK2O60296 914 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 NPTXRO95502 500 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 EEF1DP3Q658K8 133 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 FEZF2Q8TBJ5 459 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 SLC22A17Q8WUG5 538 aa27.26■■□□□ 1.95
TSEN54-209ENST00000583454 ACO2Q99798 780 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms