RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MARSP56192 900 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MCCD1P59942 119 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 DSC3Q14574 896 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ZNF568Q3ZCX4 644 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TCP11X2Q5H9J9 407 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 UBXN11Q5T124 520 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SLC27A1Q6PCB7 646 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CRELD2Q6UXH1 353 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM43BQ6ZT52 329 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FRMD5Q7Z6J6 570 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RDH13Q8NBN7 331 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SAAL1Q96ER3 474 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ADPGKQ9BRR6 497 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PPP1R12CQ9BZL4 782 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MAGEC2Q9UBF1 373 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SPTBN5Q9NRC6 3674 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 KCNJ18B7U540 433 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CXCL10P02778 98 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 EPB41P11171 864 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ZSCAN20P17040 1043 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 EEF1GP26641 437 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SPAG1Q07617 926 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 KCNJ12Q14500 433 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 HSP90AA2PQ14568 343 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 DCAF4L1Q3SXM0 396 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 APBB1IPQ7Z5R6 666 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CBWD2Q8IUF1 395 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CREBRFQ8IUR6 639 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SCLYQ96I15 445 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CNOT6LQ96LI5 555 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MFSD14AQ96MC6 490 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM213AQ9BRX8 229 aa17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 EIF2AQ9BY44 585 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 METTL14Q9HCE5 456 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 LIMA1Q9UHB6 759 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ZNF233A6NK53 670 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 NPTXRO95502 500 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 HARSP12081 509 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ACOT2P49753 483 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 POU5F1Q01860 360 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SNRNP35Q16560 246 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 KYAT1Q16773 422 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CCDC40Q4G0X9 1142 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PLEKHG4Q58EX7 1191 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ZBTB41Q5SVQ8 909 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TRAIPQ9BWF2 469 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 IFIH1Q9BYX4 1025 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CPSF3Q9UKF6 684 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MGEA5O60502 916 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ADRB2P07550 413 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RFC2P35250 354 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 KRT31Q15323 416 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SEZ6Q53EL9 994 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 APTXQ7Z2E3 356 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RTN4RL1Q86UN2 441 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 DBF4BQ8NFT6 615 aa17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RNPC3Q96LT9 517 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ARMCX3Q9UH62 379 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CLTAP09496 248 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 STAG3L1P0CL83 205 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RAG1P15918 1043 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TNFSF9P41273 254 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 GRM5P41594 1212 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MTIF2P46199 727 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FANCCQ00597 558 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ENPEPQ07075 957 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CYP24A1Q07973 514 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 INTS8Q75QN2 995 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TRIM59Q8IWR1 403 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CEP120Q8N960 986 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ANKRD20A12PQ8NF67 263 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SEPT8Q92599 483 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 APBB2Q92870 758 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 VWCEQ96DN2 955 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ADAM2Q99965 735 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TUBGCP2Q9BSJ2 902 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FTHL17Q9BXU8 183 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RGS18Q9NS28 235 aa17.78■□□□□ 0.44
CDK5RAP3-228ENST00000583363 AP5Z1O43299 807 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ZNF623O75123 536 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FOSL2P15408 326 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MRE11P49959 708 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 OSTNP61366 133 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM189BP81408 668 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MRPL10Q7Z7H8 261 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 BRSK2Q8IWQ3 736 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TMEM192Q8IY95 271 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PLEKHO2Q8TD55 490 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TMC2Q8TDI7 906 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 ACAP3Q96P50 834 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TRIM6Q9C030 488 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 RPF1Q9H9Y2 349 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms