RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 SPEGQ15772 3267 aa14.05□□□□□ -0.16
CSNK1D-218ENST00000581655 HRO43593 1189 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 TADA2AO75478 443 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 ECI2O75521 394 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 PSMD10O75832 226 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 ERLIN2O94905 339 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 PROS1P07225 676 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 CDC27P30260 824 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 CCR3P51677 355 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 NPEPPSP55786 919 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 MAMSTRQ6ZN01 415 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 ZNF687Q8N1G0 1237 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 SLC7A14Q8TBB6 771 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 MCRS1Q96EZ8 462 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 TCEANC2Q96MN5 208 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 DNMT3BQ9UBC3 853 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 CACNG4Q9UBN1 327 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
CSNK1D-218ENST00000581655 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 ADAM12O43184 909 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 GNA11P29992 359 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 SATB1Q01826 763 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 AAMPQ13685 434 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 PSMD5Q16401 504 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 CREB3L3Q68CJ9 461 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 TANGO2Q6ICL3 276 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 CEP57Q86XR8 500 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 GSTCDQ8NEC7 633 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 LNX1Q8TBB1 728 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 HASPINQ8TF76 798 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 SLC7A3Q8WY07 619 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 PIK3R5Q8WYR1 880 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 DNASE1L2Q92874 299 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 TMEM143Q96AN5 459 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 CPB2Q96IY4 423 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 IER2Q9BTL4 223 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 LMAN1LQ9HAT1 526 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 BMP2KQ9NSY1 1161 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 GIT1Q9Y2X7 761 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 MRPS23Q9Y3D9 190 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 SF3B1O75533 1304 aaKnown RBP eCLIP14.03□□□□□ -0.162e-8■■□□□ 14.4
CSNK1D-218ENST00000581655 GREB1Q4ZG55 1949 aa14.03□□□□□ -0.16
CSNK1D-218ENST00000581655 SPAG17Q6Q759 2223 aa14.02□□□□□ -0.16
CSNK1D-218ENST00000581655 CHURC1-FNTBB4DL54 471 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 TSPAN1O60635 241 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 CXCL12P48061 93 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 FNTBP49356 437 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 GRM2Q14416 872 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 NOTUMQ6P988 496 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 POTEHQ6S545 545 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 B3GNT9Q6UX72 402 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 PAAF1Q9BRP4 392 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 TTPALQ9BTX7 342 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 LSG1Q9H089 658 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 CSRNP2Q9H175 543 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 NXF3Q9H4D5 531 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 VWA8A3KMH1 1905 aa14.02□□□□□ -0.17
CSNK1D-218ENST00000581655 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 TM4SF5O14894 197 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 POU2F2P09086 479 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 AKAP5P24588 427 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 AXLP30530 894 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 ADD1P35611 737 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 PSMC5P62195 406 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 GRIK3Q13003 919 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 HSP90AA2PQ14568 343 aaPredicted RBP14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 SLC5A9Q2M3M2 681 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 FAM171A1Q5VUB5 890 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 FAM3CQ92520 227 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 ELSPBP1Q96BH3 223 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 CCDC51Q96ER9 411 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 CEP170P1Q96L14 293 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 TRIM6Q9C030 488 aaPredicted RBP14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 DHX33Q9H6R0 707 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 GDE1Q9NZC3 331 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 KLK14Q9P0G3 267 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 ZMIZ1Q9ULJ6 1067 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 COL4A2P08572 1712 aa14.01□□□□□ -0.17
CSNK1D-218ENST00000581655 C1QTNF9BB2RNN3 333 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 RHOP08100 348 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 C1QTNF9P0C862 333 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 CEBPBP17676 345 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 CNR2P34972 360 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 USP11P51784 963 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 LIMK1P53667 647 aa14□□□□□ -0.17
CSNK1D-218ENST00000581655 GAS6Q14393 721 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms