RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GOLGA6BA6NDN3 693 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 AP1G1O43747 822 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 FSBPO95073 299 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 LY86O95711 162 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 GOLGA6DP0CG33 693 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 DUSP8Q13202 625 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 GTF2H3Q13889 308 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 ACAP1Q15027 740 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 MAN2A1Q16706 1144 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 CXorf57Q6NSI4 855 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 EPM2AIP1Q7L775 607 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 CATIPQ7Z7H3 387 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 NRG4Q8WWG1 115 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 DPF2Q92785 391 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 COA7Q96BR5 231 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 ADI1Q9BV57 179 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 OSBPL6Q9BZF3 934 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 EPC1Q9H2F5 836 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 SLC6A15Q9H2J7 730 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 GREM2Q9H772 168 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 ANLNQ9NQW6 1124 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 GOLGA6AQ9NYA3 693 aa6.09□□□□□ -1.43
SMCHD1-205ENST00000581383 A0A087X1B8 175 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 A0A1W2PR48 441 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 PLSCR1O15162 318 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 LPOP22079 712 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 AKAP5P24588 427 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 MCAMP43121 646 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 SLC16A1P53985 500 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 INHBCP55103 352 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 HGFACQ04756 655 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 GFOD2Q3B7J2 385 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 MINDY4Q4G0A6 757 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 IFIT1BQ5T764 474 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 AIFM3Q96NN9 605 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 TCF25Q9BQ70 676 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 GEMIN8Q9NWZ8 242 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 SAP30BPQ9UHR5 308 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 SCOCQ9UIL1 159 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 LIMCH1Q9UPQ0 1083 aa6.08□□□□□ -1.44
SMCHD1-205ENST00000581383 VSTM5A8MXK1 200 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 KIF3BO15066 747 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 AKR1B10O60218 316 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 PRAMEF4O60810 478 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 TMEM127O75204 238 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 POU2F2P09086 479 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 GAAP10253 952 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 DPTQ07507 201 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 PPP3CAQ08209 521 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 ZNF267Q14586 743 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 RRP1BQ14684 758 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 NOMO1Q15155 1222 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 UBE3CQ15386 1083 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 ABHD15Q6UXT9 468 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 PIK3C3Q8NEB9 887 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 CACTINQ8WUQ7 758 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 MIEF2Q96C03 454 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 UIMC1Q96RL1 719 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 SLC2A4RGQ9NR83 387 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 CTDP1Q9Y5B0 961 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-205ENST00000581383 UBE2QL1A1L167 161 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 PMS2P1A4D2B8 440 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 CCDC154A6NI56 674 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 PRC1O43663 620 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 MFAP3LO75121 409 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 OFD1O75665 1012 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 HSPA6P17066 643 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 PDCP20941 246 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 EDNRBP24530 442 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 CTSSP25774 331 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 ADSLP30566 484 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 MAN2A2P49641 1150 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 INHBEP58166 350 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 FAM111BQ6SJ93 734 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 GRAMD1CQ8IYS0 662 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 GPR156Q8NFN8 814 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 OR2I1PQ8NGU4 316 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 FAM193BQ96PV7 902 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 NMRK2Q9NPI5 230 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 RBM12Q9NTZ6 932 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 IPPQ9Y573 584 aa6.06□□□□□ -1.44
SMCHD1-205ENST00000581383 RPTORQ8N122 1335 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 C2orf78A6NCI8 922 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 HTRA2O43464 458 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 RAMP2O60895 175 aa6.05□□□□□ -1.44
SMCHD1-205ENST00000581383 LTA4HP09960 611 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms