RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RECQL4O94761 1208 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 MYOGP15173 224 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 HABP4Q5JVS0 413 aaKnown RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 CEP120Q8N960 986 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 GAD1Q99259 594 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 CBWD1Q9BRT8 395 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 MRPL9Q9BYD2 267 aaKnown RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 SLC28A3Q9HAS3 691 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 PLEKHA5Q9HAU0 1116 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 RC3H2Q9HBD1 1191 aaKnown RBP16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 KIAA1586Q9HCI6 787 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 KLK14Q9P0G3 267 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 INPP5FQ9Y2H2 1132 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 ZMYM2Q9UBW7 1377 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 TTC3P53804 2025 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 INPPL1O15357 1258 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 DNAJB2P25686 324 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 RNASELQ05823 741 aaKnown RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 C12orf56Q8IXR9 622 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 TMEM192Q8IY95 271 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 ADSSL1Q8N142 457 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 FAM193BQ96PV7 902 aaPredicted RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 FAM213AQ9BRX8 229 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
SLC6A4-205ENST00000579221 PSMA7O14818 248 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 EXTL3O43909 919 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 FAM189A1O60320 539 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 CA3P07451 260 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 BMP6P22004 513 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 MLH1P40692 756 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 TNFSF9P41273 254 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 ACOT2P49753 483 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 CD302Q8IX05 232 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 LRRC43Q8N309 656 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 SAAL1Q96ER3 474 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 TSG101Q99816 390 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 MIOSQ9NXC5 875 aa16.95■□□□□ 0.3
SLC6A4-205ENST00000579221 LCHNA4D1U4 455 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 LINC01553A4QN01 128 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 GOLGA8IPA6NC78 632 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 ZNF233A6NK53 670 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 GOLGA8JA6NMD2 632 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 POMCP01189 267 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 THP07101 528 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 RPL13P26373 211 aaKnown RBP16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SCNN1GP51170 649 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 CYP2J2P51589 502 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 NLRP12P59046 1061 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 NFIL3Q16649 462 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SLC10A6Q3KNW5 377 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 ZBTB41Q5SVQ8 909 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 CENPPQ6IPU0 288 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 CAVIN1Q6NZI2 390 aaKnown RBP16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 LRRC55Q6ZSA7 311 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 RBM43Q6ZSC3 357 aaKnown RBP16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 TMEM174Q8WUU8 243 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 ZFP42Q96MM3 310 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 TSPAN18Q96SJ8 248 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 AAASQ9NRG9 546 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 TBC1D13Q9NVG8 400 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 DMAC2Q9NW81 257 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 TMEM63CQ9P1W3 806 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 RWDD3Q9Y3V2 267 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 MRPL42Q9Y6G3 142 aaKnown RBP16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 CEP290O15078 2479 aa16.94■□□□□ 0.3
SLC6A4-205ENST00000579221 SMIM28A0A1B0GU29 152 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 CARNS1A5YM72 827 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 LACTBL1A8MY62 500 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 EXOC3O60645 756 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 LETM1O95202 739 aaPredicted RBP16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 NR3C1P04150 777 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 ADRB2P07550 413 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms