RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 PDILTQ8N807 584 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 CCDC43Q96MW1 224 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 HSD17B14Q9BPX1 270 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 MMTAG2Q9BU76 263 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 RSAD1Q9HA92 442 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
SCAMP2-210ENST00000569124 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 MBD3O95983 291 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 CLCN4P51793 760 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 HYIQ5T013 277 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 ZNF280BQ86YH2 543 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 IQUBQ8NA54 791 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 NKD2Q969F2 451 aaPredicted RBP17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 NACC1Q96RE7 527 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 USP25Q9UHP3 1055 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 FBXL21Q9UKT6 434 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 DNM3Q9UQ16 869 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
SCAMP2-210ENST00000569124 PATJQ8NI35 1801 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 FAM237AA0A1B0GTK4 181 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 B4GALT3O60512 393 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 URODP06132 367 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 SPATA31C1P0DKV0 1188 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 PLCG1P19174 1290 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 NDUFA8P51970 172 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 TDGQ13569 410 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 ANO5Q75V66 913 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 OTUD6AQ7L8S5 288 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 CEP57L1Q8IYX8 460 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 DHX58Q96C10 678 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 PLIN2Q99541 437 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
SCAMP2-210ENST00000569124 KINO60870 393 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 LYPLA2O95372 231 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 AOC1P19801 751 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 FOXK2Q01167 660 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 TMEM119Q4V9L6 283 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 EXOC8Q8IYI6 725 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 PSPC1Q8WXF1 523 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 GOLPH3LQ9H4A5 285 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 MAN1C1Q9NR34 630 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 DMDP11532 3685 aa17.06■□□□□ 0.32
SCAMP2-210ENST00000569124 CACNA1IQ9P0X4 2223 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 C2CD2LO14523 706 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 DDHD2O94830 711 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 ZNF202O95125 648 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 POMCP01189 267 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 SOD2P04179 222 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 ALDH2P05091 517 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 ADH1AP07327 375 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 YWHABP31946 246 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 RFC5P40937 340 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 MRPL10Q7Z7H8 261 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 LARP4BQ92615 738 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 CEP170P1Q96L14 293 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 RTP3Q9BQQ7 232 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 HERC2P3Q9BVR0 1158 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 KCNK12Q9HB15 430 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 IGSF9Q9P2J2 1179 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 PPME1Q9Y570 386 aa17.05■□□□□ 0.32
SCAMP2-210ENST00000569124 EP300Q09472 2414 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 NRP1O14786 923 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 ERLIN2O94905 339 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms