RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZNF205O95201 554 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 MMEP08473 750 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 NCAM1P13591 858 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 EEF1GP26641 437 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TSPAN7P41732 249 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TUBP50607 506 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 PCBP3P57721 371 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CREMQ03060 361 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 PPARAQ07869 468 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CACNB2Q08289 660 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TRIM25Q14258 630 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 KRT32Q14532 448 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 EPHA7Q15375 998 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 SURF1Q15526 300 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CATSPEREQ5SY80 951 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 SFRP5Q5T4F7 317 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CFAP58Q5T655 872 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 FYB2Q5VWT5 728 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 SPATA1Q5VX52 437 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TIGD7Q6NT04 549 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 KLHDC10Q6PID8 442 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 FBXO38Q6PIJ6 1188 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ENOSF1Q7L5Y1 443 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 GALNT5Q7Z7M9 940 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 SESTD1Q86VW0 696 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 SNX32Q86XE0 403 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 C2CD5Q86YS7 1000 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 COLGALT2Q8IYK4 626 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 GALNT15Q8N3T1 639 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CELF5Q8N6W0 485 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF655Q8N720 491 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 DAGLBQ8NCG7 672 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 HIPK4Q8NE63 616 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 IL31RAQ8NI17 732 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 IPO4Q8TEX9 1081 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 DPF3Q92784 378 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 DLG3Q92796 817 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 KCNN1Q92952 543 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 RILPL2Q969X0 211 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ATP6V1E2Q96A05 226 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 C16orf92Q96LL3 132 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ADI1Q9BV57 179 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 EPB41L4BQ9H329 900 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 EPB41L1Q9H4G0 881 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ZCCHC4Q9H5U6 513 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 WASH6PQ9NQA3 447 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 PRDM5Q9NQX1 630 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 LMBRD1Q9NUN5 540 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 CPNE7Q9UBL6 633 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 GULP1Q9UBP9 304 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TCFL5Q9UL49 500 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 USP18Q9UMW8 372 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ARHGAP26Q9UNA1 814 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF281Q9Y2X9 895 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 PCDHA3Q9Y5H8 950 aa3.84□□□□□ -1.79
HERPUD1-211ENST00000566550 A0A088AWK7 358 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 GNAT3A8MTJ3 354 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PRR33A8MZF0 331 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 B4DLN1 442 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 C22orf46C9J442 243 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 H7BY64 318 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 IGF2BP3O00425 579 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PODXLO00592 558 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 AREL1O15033 823 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 FGF10O15520 208 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 AHCYL1O43865 530 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 BUB1BO60566 1050 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CLASP2O75122 1294 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 LEFTY1O75610 366 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SOAT2O75908 522 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PRPF6O94906 941 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PCDH8O95206 1070 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 TNFRSF6BO95407 300 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 EOMESO95936 686 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 THP07101 528 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 MYL4P12829 197 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 RAC2P15153 192 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SYN1P17600 705 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 GLDCP23378 1020 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CLCN7P51798 805 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SUMO3P55854 103 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 FMO1Q01740 532 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 MAP3K12Q12852 859 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 MALLQ13021 153 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 NOGQ13253 232 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 MOGSQ13724 837 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PLCB4Q15147 1175 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 NOMO1Q15155 1222 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 NR0B2Q15466 257 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 TAF11Q15544 211 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SMAD1Q15797 465 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CNGA2Q16280 664 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CCDC92Q53HC0 331 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 C3orf38Q5JPI3 329 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 THEMIS2Q5TEJ8 643 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SULT6B1Q6IMI4 303 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 ZPBP2Q6X784 338 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 DSTYKQ6XUX3 929 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms