RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MAP2K7O14733 419 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 TUBBP07437 444 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 MYBL2P10244 700 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 CLDN10P78369 228 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 ENPEPQ07075 957 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 GJC2Q5T442 439 aaPredicted RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 PNMA8AQ86V59 439 aaPredicted RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 GSPT2Q8IYD1 628 aaKnown RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 ATP8B4Q8TF62 1192 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 MS4A4AQ96JQ5 239 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 MSTO1Q9BUK6 570 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 KIAA1586Q9HCI6 787 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 DMGDHQ9UI17 866 aaKnown RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 COG5Q9UP83 839 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 BTBD19C9JJ37 291 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 PDHXO00330 501 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 BUB1BO60566 1050 aaPredicted RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 HARSP12081 509 aaKnown RBP20.62■□□□□ 0.89
SMPD3-203ENST00000563226 ARMCX2Q7L311 632 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 DAAM2Q86T65 1068 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 PNMA3Q9UL41 463 aa20.62■□□□□ 0.89
SMPD3-203ENST00000563226 A0A0B4J269 797 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 ANKRD62A6NC57 917 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 CALCAP01258 141 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 MMEP08473 750 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 SLC7A5Q01650 507 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 TDRD10Q5VZ19 366 aaKnown RBP20.61■□□□□ 0.89
SMPD3-203ENST00000563226 PLPPR4Q7Z2D5 763 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 PEX26Q7Z412 305 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 NT5DC3Q86UY8 548 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 GPRC5AQ8NFJ5 357 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 TAF4BQ92750 862 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 ZBTB9Q96C00 473 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 RBAKQ9NYW8 714 aaPredicted RBP20.61■□□□□ 0.89
SMPD3-203ENST00000563226 RNF14Q9UBS8 474 aa20.61■□□□□ 0.89
SMPD3-203ENST00000563226 FTLP02792 175 aaPredicted RBP20.6■□□□□ 0.89
SMPD3-203ENST00000563226 TNNI1P19237 187 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 FMO1Q01740 532 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 LAMTOR4Q0VGL1 99 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 ZACNQ401N2 412 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 FNBP1Q96RU3 617 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 ISCUQ9H1K1 167 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 EVPLQ92817 2033 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 CCL15-CCL14A0A0B4J2E2 113 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 IGKV6-21A0A0C4DH24 114 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 C4BPAP04003 597 aaKnown RBP20.6■□□□□ 0.89
SMPD3-203ENST00000563226 GJB1P08034 283 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 SRGAP2CP0DJJ0 459 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 CYP11B1P15538 503 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 SCP2P22307 547 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 CCL15Q16663 113 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 SLFN12LQ6IEE8 588 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 METTL13Q8N6R0 699 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 BRI3BPQ8WY22 251 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 ZNF668Q96K58 619 aaPredicted RBP20.6■□□□□ 0.89
SMPD3-203ENST00000563226 UBXN6Q9BZV1 441 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 PRDM10Q9NQV6 1147 aa20.6■□□□□ 0.89
SMPD3-203ENST00000563226 KIAA0391O15091 583 aaKnown RBP20.59■□□□□ 0.89
SMPD3-203ENST00000563226 MSCO60682 206 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 VNN1O95497 513 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 HLA-DRAP01903 254 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 ADORA2AP29274 412 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 TTLL4Q14679 1199 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 ZNF792Q3KQV3 632 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 IER5Q5VY09 327 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 SCARA3Q6AZY7 606 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 SPOPLQ6IQ16 392 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 LMBR1Q8WVP7 490 aa20.59■□□□□ 0.89
SMPD3-203ENST00000563226 CHORDC1Q9UHD1 332 aaPredicted RBP20.59■□□□□ 0.89
SMPD3-203ENST00000563226 ASB14A6NK59 587 aa20.58■□□□□ 0.89
SMPD3-203ENST00000563226 CDCA2Q69YH5 1023 aaPredicted RBP20.58■□□□□ 0.89
SMPD3-203ENST00000563226 HDXQ7Z353 690 aa20.58■□□□□ 0.89
SMPD3-203ENST00000563226 RNF149Q8NC42 400 aa20.58■□□□□ 0.89
SMPD3-203ENST00000563226 SUCLA2Q9P2R7 463 aaPredicted RBP20.58■□□□□ 0.89
SMPD3-203ENST00000563226 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
SMPD3-203ENST00000563226 CNTNAP2Q9UHC6 1331 aa20.58■□□□□ 0.89
SMPD3-203ENST00000563226 CES2O00748 559 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 TNFSF9P41273 254 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 GCNT1Q02742 428 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 ARHGAP1Q07960 439 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 CCNI2Q6ZMN8 369 aaPredicted RBP20.58■□□□□ 0.88
SMPD3-203ENST00000563226 ZBTB33Q86T24 672 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 SYCE1Q8N0S2 351 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 USP38Q8NB14 1042 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 OR5B17Q8NGF7 314 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 SCFD2Q8WU76 684 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 DDX1Q92499 740 aaKnown RBP20.58■□□□□ 0.88
SMPD3-203ENST00000563226 HES6Q96HZ4 224 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 C1orf112Q9NSG2 853 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 DIS3Q9Y2L1 958 aaKnown RBP20.58■□□□□ 0.88
SMPD3-203ENST00000563226 PPME1Q9Y570 386 aa20.58■□□□□ 0.88
SMPD3-203ENST00000563226 ATMINO43313 823 aaPredicted RBP20.57■□□□□ 0.88
SMPD3-203ENST00000563226 CEP104O60308 925 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 FAM189A1O60320 539 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 RTN2O75298 545 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 CETPP11597 493 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms