RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 RFXAPO00287 272 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 B4GALT3O60512 393 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 GRM5P41594 1212 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 SCNN1GP51170 649 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 STK4Q13043 487 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 EPC2Q52LR7 807 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 URGCPQ8TCY9 931 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 SCFD1Q8WVM8 642 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 CLP1Q92989 425 aaKnown RBP16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 MRPL9Q9BYD2 267 aaKnown RBP16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 PRDM12Q9H4Q4 367 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 UBN1Q9NPG3 1134 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 EXOC7Q9UPT5 735 aa16.96■□□□□ 0.31
LYSMD2-204ENST00000560491 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 PBX3P40426 434 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 ZNF280BQ86YH2 543 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 NELFCDQ8IXH7 590 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 GSTCDQ8NEC7 633 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 ZNF507Q8TCN5 953 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 GUCD1Q96NT3 240 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 TMEM206Q9H813 350 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 ANK1P16157 1881 aa16.95■□□□□ 0.3
LYSMD2-204ENST00000560491 ATG2AQ2TAZ0 1938 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 MYO9BQ13459 2157 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 A0A0B4J269 797 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 INPPL1O15357 1258 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 MEFVO15553 781 aaPredicted RBP16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 FAM189A1O60320 539 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 ZC3H11AO75152 810 aaKnown RBP eCLIP16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 DDHD2O94830 711 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 RHOBTB3O94955 611 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 ADSSP30520 456 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 BMPR1AP36894 532 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 TNFSF9P41273 254 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 RNASELQ05823 741 aaKnown RBP16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 COLGALT1Q8NBJ5 622 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 SAMD11Q96NU1 681 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 MTMR10Q9NXD2 777 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 DNAJB4Q9UDY4 337 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 RWDD3Q9Y3V2 267 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 STYXL1Q9Y6J8 313 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 UBE4BO95155 1302 aa16.94■□□□□ 0.3
LYSMD2-204ENST00000560491 PTGESO14684 152 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 OGTO15294 1046 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 LAG3P18627 525 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 PSMD2Q13200 908 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 KCNB1Q14721 858 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 ZSWIM2Q8NEG5 633 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 MYLIPQ8WY64 445 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 RSPH1Q8WYR4 309 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 SNX27Q96L92 541 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 ACAP3Q96P50 834 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 CBWD1Q9BRT8 395 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
LYSMD2-204ENST00000560491 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 CXCL8P10145 99 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 ACOT2P49753 483 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 YARSP54577 528 aaKnown RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 BCAR1P56945 870 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 GRIK3Q13003 919 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 CAMK4Q16566 473 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 KCNT2Q6UVM3 1135 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 ELOA2Q8IYF1 753 aaPredicted RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 KLHL23Q8NBE8 558 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 SAAL1Q96ER3 474 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 FAM193BQ96PV7 902 aaPredicted RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 TOPORSQ9NS56 1045 aaPredicted RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 KANSL3Q9P2N6 904 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
LYSMD2-204ENST00000560491 TRANK1O15050 2925 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 LPXNO60711 386 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 CSPG5O95196 566 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms