RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CXCL16Q9H2A7 254 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 CWH43Q9H720 699 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 MTMR10Q9NXD2 777 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 EXOC7Q9UPT5 735 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 TRANK1O15050 2925 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 B4GALT3O60512 393 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 ZC3H11AO75152 810 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP3-205ENST00000557884 CSPG5O95196 566 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 STK4Q13043 487 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 ZBTB41Q5SVQ8 909 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 EPM2AIP1Q7L775 607 aaPredicted RBP15.67■□□□□ 0.1
USP3-205ENST00000557884 ZNF280BQ86YH2 543 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 COLGALT1Q8NBJ5 622 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 SCFD1Q8WVM8 642 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 MYLIPQ8WY64 445 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 CCDC47Q96A33 483 aaKnown RBP15.67■□□□□ 0.1
USP3-205ENST00000557884 TIGD1Q96MW7 591 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 SAMD11Q96NU1 681 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 CDX2Q99626 313 aaPredicted RBP15.67■□□□□ 0.1
USP3-205ENST00000557884 GBF1Q92538 1859 aa15.67■□□□□ 0.1
USP3-205ENST00000557884 A0A0B4J269 797 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 EIF3DO15371 548 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP3-205ENST00000557884 DDHD2O94830 711 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 LAG3P18627 525 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 HOXD13P35453 343 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 YARSP54577 528 aaKnown RBP15.66■□□□□ 0.1
USP3-205ENST00000557884 GLRA4Q5JXX5 417 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 POMGNT1Q8WZA1 660 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 ZNF558Q96NG5 402 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 ACAP3Q96P50 834 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 FAM193BQ96PV7 902 aaPredicted RBP15.66■□□□□ 0.1
USP3-205ENST00000557884 NRDE2Q9H7Z3 1164 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 AAASQ9NRG9 546 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 DNAJB4Q9UDY4 337 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 PLAGL2Q9UPG8 496 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 RWDD3Q9Y3V2 267 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 PCDHB12Q9Y5F1 795 aa15.66■□□□□ 0.1
USP3-205ENST00000557884 ZMYM2Q9UBW7 1377 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 NT5C1B-RDH14C9J2C7 533 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 PTGESO14684 152 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 OGTO15294 1046 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 INPPL1O15357 1258 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 CXCL8P10145 99 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 IGFBP4P22692 258 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 ADSSP30520 456 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 TNFSF9P41273 254 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 BCAR1P56945 870 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 GPM6BQ13491 265 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 ADGRE1Q14246 886 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 KCNT2Q6UVM3 1135 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 KLHL23Q8NBE8 558 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 GSTCDQ8NEC7 633 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 NOC3LQ8WTT2 800 aaKnown RBP15.65■□□□□ 0.1
USP3-205ENST00000557884 RSPH1Q8WYR4 309 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 PCIF1Q9H4Z3 704 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 TMEM206Q9H813 350 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 KANSL3Q9P2N6 904 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
USP3-205ENST00000557884 AGO2Q9UKV8 859 aaKnown RBP15.65■□□□□ 0.1
USP3-205ENST00000557884 UBE4BO95155 1302 aa15.65■□□□□ 0.1
USP3-205ENST00000557884 TULP1O00294 542 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 GRM6O15303 877 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 MEFVO15553 781 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 FAM189A1O60320 539 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 LPXNO60711 386 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 RHOBTB3O94955 611 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SMC2O95347 1197 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 RB1P06400 928 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 CLTAP09496 248 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SLC11A1P49279 550 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 ACOT2P49753 483 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 GRIK3Q13003 919 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 PSMD2Q13200 908 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 KCNB1Q14721 858 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SLFN12LQ6IEE8 588 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 ZSWIM2Q8NEG5 633 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SMARCE1Q969G3 411 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SAAL1Q96ER3 474 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 SNX27Q96L92 541 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 GAS2L1Q99501 681 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 CBWD1Q9BRT8 395 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 C11orf84Q9BUA3 381 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 ALG13Q9NP73 1137 aaKnown RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 TOPORSQ9NS56 1045 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 CACNG4Q9UBN1 327 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 MAPK8IP1Q9UQF2 711 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 PRG3Q9Y2Y8 225 aaPredicted RBP15.64■□□□□ 0.09
USP3-205ENST00000557884 PCDHA5Q9Y5H7 936 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 STYXL1Q9Y6J8 313 aa15.64■□□□□ 0.09
USP3-205ENST00000557884 GOLGA8IPA6NC78 632 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 GOLGA8JA6NMD2 632 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 C5orf67F2Z3F1 127 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 GOLGA6L22H0YM25 854 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 H3BNC9 293 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 ITGB1P05556 798 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms