RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 EPC2Q52LR7 807 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 SGO2Q562F6 1265 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 NSMCE1Q8WV22 266 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 GMCL1Q96IK5 515 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 FAM118BQ9BPY3 351 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
SRP54-213ENST00000556994 KRT16P08779 473 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 RWDD2BP57060 319 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 FMO1Q01740 532 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 RASA3Q14644 834 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 DAB2IPQ5VWQ8 1189 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 TATDN1Q6P1N9 297 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
SRP54-213ENST00000556994 CYFIP1Q7L576 1253 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CROCCP2Q86T23 111 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CYP4X1Q8N118 509 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 RUNDC3BQ96NL0 473 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 STRA6Q9BX79 667 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 TRIM7Q9C029 511 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 TMEM150BA6NC51 233 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CDC25CP30307 473 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 ZNF568Q3ZCX4 644 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CEP55Q53EZ4 464 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 C2CD6Q53TS8 623 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 FITM2Q8N6M3 262 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 CCDC127Q96BQ5 260 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 KLHL29Q96CT2 875 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 HERPUD2Q9BSE4 406 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
SRP54-213ENST00000556994 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
SRP54-213ENST00000556994 UBE4BO95155 1302 aa12.2□□□□□ -0.46
SRP54-213ENST00000556994 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 SUN1O94901 812 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 CETPP11597 493 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 BRAFP15056 766 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 ADRA2BP18089 450 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 RFX1P22670 979 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 MXI1P50539 228 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 ITGA8P53708 1063 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 ZNF268Q14587 947 aaPredicted RBP12.19□□□□□ -0.46
SRP54-213ENST00000556994 GALNTL6Q49A17 601 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 TRMT10CQ7L0Y3 403 aaKnown RBP12.19□□□□□ -0.46
SRP54-213ENST00000556994 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 DHX38Q92620 1227 aaKnown RBP12.19□□□□□ -0.46
SRP54-213ENST00000556994 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 HSPBP1Q9NZL4 362 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
SRP54-213ENST00000556994 ADRB2P07550 413 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 PAX7P23759 505 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 COPS2P61201 443 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 TCEAL1Q15170 157 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 VPS72Q15906 364 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 SPATA21Q7Z572 469 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 PRUNE1Q86TP1 453 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 XXYLT1Q8NBI6 393 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
SRP54-213ENST00000556994 FAM84AQ96KN4 292 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 HEMGNQ9BXL5 484 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 EBF2Q9HAK2 575 aa12.19□□□□□ -0.46
SRP54-213ENST00000556994 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 POLRMTO00411 1230 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 THAP12O43422 761 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 CYP1A2P05177 515 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 GZMAP12544 262 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 CYP11B1P15538 503 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 STAT2P52630 851 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 MGAT5Q09328 741 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 BNIP1Q12981 228 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 RIPK1Q13546 671 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 SRRM1Q8IYB3 904 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 CKAP2Q8WWK9 683 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 SAAL1Q96ER3 474 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 SERPINB12Q96P63 405 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 TGS1Q96RS0 853 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
SRP54-213ENST00000556994 GPRC5CQ9NQ84 441 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
SRP54-213ENST00000556994 SLC16A4O15374 487 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 DIAPH2O60879 1101 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms