RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 NASPP49321 788 aaPredicted RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 OSTNP61366 133 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 ZP2Q05996 745 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 GRIK3Q13003 919 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 COASYQ13057 564 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 SMAD4Q13485 552 aaKnown RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 SMAD2Q15796 467 aaKnown RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 DCAF4L1Q3SXM0 396 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 SEZ6Q53EL9 994 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 GLRA4Q5JXX5 417 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 ANKRD54Q6NXT1 300 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 KANK3Q6NY19 840 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 TMEM184AQ6ZMB5 413 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 HACE1Q8IYU2 909 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 RNF168Q8IYW5 571 aaPredicted RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 LINC00301Q8NCQ3 95 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 SMRP1Q8NCR6 262 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 RASSF8Q8NHQ8 419 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 FIZ1Q96SL8 496 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 CDCA3Q99618 268 aaPredicted RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 ADPGKQ9BRR6 497 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 HERC2P3Q9BVR0 1158 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 MRPL4Q9BYD3 311 aaKnown RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 PANK2Q9BZ23 570 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 GPR62Q9BZJ7 368 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 S1PR5Q9H228 398 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 ZSCAN16Q9H4T2 348 aaPredicted RBP8.91□□□□□ -0.98
VTI1B-206ENST00000556461 C17orf75Q9HAS0 396 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 TNFSF13BQ9Y275 285 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 HCFC2Q9Y5Z7 792 aa8.91□□□□□ -0.98
VTI1B-206ENST00000556461 ZMYM2Q9UBW7 1377 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 MYMKA6NI61 221 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 C2CD2LO14523 706 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 SOD2P04179 222 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 CNPP09543 421 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 ZSCAN22P10073 491 aaPredicted RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 HARSP12081 509 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 NMT1P30419 496 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 DDIT3P35638 169 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 ZNF131P52739 623 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 NCKAP1LP55160 1127 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 TUSC3Q13454 348 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 STK38Q15208 465 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 PUS10Q3MIT2 529 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 ZNF568Q3ZCX4 644 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 KIAA0319Q5VV43 1072 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 CD300LGQ6UXG3 332 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 MYCT1Q8N699 235 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 C12orf76Q8N812 135 aaPredicted RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 HASPINQ8TF76 798 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 SLC22A17Q8WUG5 538 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 LARP4BQ92615 738 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 CHAMP1Q96JM3 812 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 ZMAT2Q96NC0 199 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 KLHL5Q96PQ7 755 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 RPS6KC1Q96S38 1066 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 IKZF4Q9H2S9 585 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 EPHX3Q9H6B9 360 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 KCND2Q9NZV8 630 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 USP15Q9Y4E8 981 aaPredicted RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
VTI1B-206ENST00000556461 MORC2Q9Y6X9 1032 aaPredicted RBP8.9□□□□□ -0.98
VTI1B-206ENST00000556461 C19orf67A6NJJ6 358 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 SPTLC2O15270 562 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 FAM13AO94988 1023 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 KIF4AO95239 1232 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 BRD1O95696 1058 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 F13A1P00488 732 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 KRT18P05783 430 aaKnown RBP8.89□□□□□ -0.99
VTI1B-206ENST00000556461 THP07101 528 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 WEE2P0C1S8 567 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 MYBP10242 640 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 MCF2P10911 925 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 GRM5P41594 1212 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 SOX4Q06945 474 aaPredicted RBP8.89□□□□□ -0.99
VTI1B-206ENST00000556461 HSP90AA2PQ14568 343 aaPredicted RBP8.89□□□□□ -0.99
VTI1B-206ENST00000556461 XKR4Q5GH76 650 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 RTP2Q5QGT7 225 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 ZBTB41Q5SVQ8 909 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 RRAGBQ5VZM2 374 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 FUT10Q6P4F1 479 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 MPZL3Q6UWV2 235 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 ALKAL1Q6UXT8 129 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 DYMQ7RTS9 669 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 HAUS6Q7Z4H7 955 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 GJD3Q8N144 294 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 SUSD6Q92537 303 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 PPP1R10Q96QC0 940 aaKnown RBP8.89□□□□□ -0.99
VTI1B-206ENST00000556461 COLEC11Q9BWP8 271 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 ZHX3Q9H4I2 956 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 PARVGQ9HBI0 331 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 CHST7Q9NS84 486 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 ANKFY1Q9P2R3 1169 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
VTI1B-206ENST00000556461 ODF2LQ9ULJ1 636 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms