RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PTPN7P35236 360 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 NPEPPSP55786 919 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 RHBDL3P58872 404 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 RAC3P60763 192 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 ADAM8P78325 824 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 SP140Q13342 867 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 LLGL1Q15334 1064 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 XP32Q5T750 250 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 NPNTQ6UXI9 565 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 SP8Q8IXZ3 490 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 OR5M3Q8NGP4 307 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 MOCS1Q9NZB8 636 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 L1RE1Q9UN81 338 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 ADCY6O43306 1168 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 SASH1O94885 1247 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 AMY1AP04745 511 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 DDCP20711 480 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 CASRP41180 1078 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 GPSM2P81274 684 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 BRD3Q15059 726 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 ATP2B3Q16720 1220 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 KIAA0753Q2KHM9 967 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 PRAMEF14Q5SWL7 426 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 HEATR3Q7Z4Q2 680 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 LGI4Q8N135 537 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 FAM156AQ8NDB6 213 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 IFI44Q8TCB0 444 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 TOX2Q96NM4 488 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 GPHA2Q96T91 129 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 PTPN18Q99952 460 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 LDAHQ9H6V9 325 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 IL23AQ9NPF7 189 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 NCDNQ9UBB6 729 aa6.82□□□□□ -1.32
CKS1BP1-201ENST00000555221 A0A088AWK7 358 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 GOLIM4O00461 696 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 B4GALT3O60512 393 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 PEX14O75381 377 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 FTH1P19P0C7X4 201 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 GZMKP49863 264 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 CTXN1P60606 82 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 ATP8B2P98198 1209 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 TLE1Q04724 770 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 MTM1Q13496 603 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 SURF1Q15526 300 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 SYCP2LQ5T4T6 812 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 ZNF572Q7Z3I7 529 aaPredicted RBP6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 ZGPATQ8N5A5 531 aaKnown RBP6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 SAMD3Q8N6K7 520 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 REPS2Q8NFH8 660 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 MDM1Q8TC05 714 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 CFHR4Q92496 578 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 RAB24Q969Q5 203 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 DMRTA2Q96SC8 542 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 C12orf65Q9H3J6 166 aaKnown RBP6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 SEC61A2Q9H9S3 476 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 FAM50BQ9Y247 325 aa6.81□□□□□ -1.32
CKS1BP1-201ENST00000555221 LRRC14BA6NHZ5 514 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 H3BUI4 141 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 APAF1O14727 1248 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 CNOT4O95628 575 aaKnown RBP6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 MALP21145 153 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 FLT3LGP49771 235 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 RAB1AP62820 205 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 APBA1Q02410 837 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 PTH1RQ03431 593 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 BIRC2Q13490 618 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 ACAP1Q15027 740 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 ZNF124Q15973 351 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 FAM47AQ5JRC9 791 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 RNF220Q5VTB9 566 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 MAEAQ7L5Y9 396 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 ADGRE4PQ86SQ3 457 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 SHCBP1Q8NEM2 672 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 VRK1Q99986 396 aaPredicted RBP6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 ENKD1Q9H0I2 346 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 WDCPQ9H6R7 721 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 FEZ2Q9UHY8 353 aaPredicted RBP6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 OAZ3Q9UMX2 235 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 PCDHA3Q9Y5H8 950 aa6.8□□□□□ -1.32
CKS1BP1-201ENST00000555221 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 UBE2QL1A1L167 161 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 MGEA5O60502 916 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 TYRP14679 529 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 ALOX15P16050 662 aaPredicted RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 PCSK1P29120 753 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 TXKP42681 527 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 PPP2CBP62714 309 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms