RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LPXNO60711 386 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 RPN1P04843 607 aaKnown RBP24.64■■□□□ 1.54
BRF1-216ENST00000550208 RNASELQ05823 741 aaKnown RBP24.64■■□□□ 1.54
BRF1-216ENST00000550208 EPM2AIP1Q7L775 607 aaPredicted RBP24.64■■□□□ 1.54
BRF1-216ENST00000550208 ZNF507Q8TCN5 953 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 GDPD5Q8WTR4 605 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 RSPH1Q8WYR4 309 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 TIGD1Q96MW7 591 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 CCDC94Q9BW85 323 aaPredicted RBP24.64■■□□□ 1.54
BRF1-216ENST00000550208 GBP3Q9H0R5 595 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 AAASQ9NRG9 546 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 EXOC7Q9UPT5 735 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 PCDHB12Q9Y5F1 795 aa24.64■■□□□ 1.54
BRF1-216ENST00000550208 NLRC5Q86WI3 1866 aa24.64■■□□□ 1.53
BRF1-216ENST00000550208 B4GALT3O60512 393 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 LAG3P18627 525 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 HOXD13P35453 343 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 PBX3P40426 434 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 UBE2HP62256 183 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 KCNT2Q6UVM3 1135 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 STXBP4Q6ZWJ1 553 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 SYCP3Q8IZU3 236 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 KLHL23Q8NBE8 558 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 ACAP3Q96P50 834 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 PLVAPQ9BX97 442 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 DNAJB4Q9UDY4 337 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 KIAA1671Q9BY89 1806 aa24.63■■□□□ 1.53
BRF1-216ENST00000550208 A0A0B4J269 797 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 BCAR1P56945 870 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 STK4Q13043 487 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 PNOCQ13519 176 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 POSTNQ15063 836 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 SLFN12LQ6IEE8 588 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 ZNF558Q96NG5 402 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 FAM193BQ96PV7 902 aaPredicted RBP24.62■■□□□ 1.53
BRF1-216ENST00000550208 GAS2L1Q99501 681 aaPredicted RBP24.62■■□□□ 1.53
BRF1-216ENST00000550208 TMEM206Q9H813 350 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 ALG13Q9NP73 1137 aaKnown RBP24.62■■□□□ 1.53
BRF1-216ENST00000550208 EXOC1Q9NV70 894 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 PLAGL2Q9UPG8 496 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 STYXL1Q9Y6J8 313 aa24.62■■□□□ 1.53
BRF1-216ENST00000550208 NT5C1B-RDH14C9J2C7 533 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 PTGESO14684 152 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 ZC3H11AO75152 810 aaKnown RBP eCLIP24.61■■□□□ 1.53
BRF1-216ENST00000550208 GALTP07902 379 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 IGFBP4P22692 258 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 ADSSP30520 456 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 PSMD2Q13200 908 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 ZBTB41Q5SVQ8 909 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 SCFD1Q8WVM8 642 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 P2RX5Q93086 422 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 CCDC34Q96HJ3 373 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 RPS6KC1Q96S38 1066 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 C11orf84Q9BUA3 381 aaPredicted RBP24.61■■□□□ 1.53
BRF1-216ENST00000550208 MSTO1Q9BUK6 570 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 RALGAPA2Q2PPJ7 1873 aa24.61■■□□□ 1.53
BRF1-216ENST00000550208 ZMYM2Q9UBW7 1377 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 OGTO15294 1046 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 GRM6O15303 877 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 EIF3DO15371 548 aaKnown RBP eCLIP24.6■■□□□ 1.53
BRF1-216ENST00000550208 MEFVO15553 781 aaPredicted RBP24.6■■□□□ 1.53
BRF1-216ENST00000550208 ITGB1P05556 798 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 TNFSF9P41273 254 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 YARSP54577 528 aaKnown RBP24.6■■□□□ 1.53
BRF1-216ENST00000550208 SLC10A6Q3KNW5 377 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 ALKAL1Q6UXT8 129 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 NELFCDQ8IXH7 590 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 SPPL3Q8TCT6 385 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 CHD7Q9P2D1 2997 aa24.6■■□□□ 1.53
BRF1-216ENST00000550208 FAM189A1O60320 539 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 ALDH2P05091 517 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 SLC11A1P49279 550 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 ALDH7A1P49419 539 aaKnown RBP24.59■■□□□ 1.53
BRF1-216ENST00000550208 COLGALT2Q8IYK4 626 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 KIAA0895Q8NCT3 520 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 POMGNT1Q8WZA1 660 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 ERCC4Q92889 916 aaPredicted RBP24.59■■□□□ 1.53
BRF1-216ENST00000550208 CCDC47Q96A33 483 aaKnown RBP24.59■■□□□ 1.53
BRF1-216ENST00000550208 SPG21Q9NZD8 308 aa24.59■■□□□ 1.53
BRF1-216ENST00000550208 AGO2Q9UKV8 859 aaKnown RBP24.59■■□□□ 1.53
BRF1-216ENST00000550208 KINO60870 393 aaKnown RBP24.58■■□□□ 1.53
BRF1-216ENST00000550208 FGF18O76093 207 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 RHOBTB3O94955 611 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 THP07101 528 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 CLTAP09496 248 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 FOSL2P15408 326 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 DSC1Q08554 894 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 GRIK3Q13003 919 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 XKR4Q5GH76 650 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 GLRA4Q5JXX5 417 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 SLC39A11Q8N1S5 342 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 TMEM175Q9BSA9 504 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 TOPORSQ9NS56 1045 aaPredicted RBP24.58■■□□□ 1.53
BRF1-216ENST00000550208 FAN1Q9Y2M0 1017 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 MTCH2Q9Y6C9 303 aa24.58■■□□□ 1.53
BRF1-216ENST00000550208 TRIP11Q15643 1979 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 SMIM28A0A1B0GU29 152 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 TGFB1I1O43294 461 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 POU3F3P20264 500 aaPredicted RBP24.57■■□□□ 1.52
BRF1-216ENST00000550208 DNAJB1P25685 340 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms