RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 SF3A2Q15428 464 aaKnown RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 USP41Q3LFD5 358 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 LAIR1Q6GTX8 287 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 RSPH1Q8WYR4 309 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 RIT2Q99578 217 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 INO80BQ9C086 356 aaPredicted RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 SH2B1Q9NRF2 756 aaPredicted RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 ADAM28Q9UKQ2 775 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 ANGPTL2Q9UKU9 493 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 SSX2IPQ9Y2D8 614 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 ZFP37Q9Y6Q3 630 aaPredicted RBP9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 TRIP11Q15643 1979 aa9.68□□□□□ -0.86
AC055716.1-201ENST00000550077 KLF18A0A0U1RQI7 1052 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 ESYT2A0FGR8 921 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 CARNS1A5YM72 827 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 B4GALT5O43286 388 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 RETP07949 1114 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 CEBPBP17676 345 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 SFNP31947 248 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 ANP32AP39687 249 aaKnown RBP9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 JAK3P52333 1124 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 CDC42EP1Q00587 391 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 ADCY1Q08828 1119 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 CSRP2Q16527 193 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 PPM1LQ5SGD2 360 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 ZNF852Q6ZMS4 543 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 MTSS1LQ765P7 747 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 SLC7A14Q8TBB6 771 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 TCEAL4Q96EI5 215 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 ZSWIM3Q96MP5 696 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 COLEC11Q9BWP8 271 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 SMOC1Q9H4F8 434 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 RBM12Q9NTZ6 932 aaKnown RBP9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 STK39Q9UEW8 545 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 DPP7Q9UHL4 492 aa9.67□□□□□ -0.86
AC055716.1-201ENST00000550077 SPEGQ15772 3267 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 CASTOR2A6NHX0 329 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 TTLL13PA6NNM8 815 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 hCG_1984214I3L0E3 225 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 KIF4AO95239 1232 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 TOP3BO95985 862 aaKnown RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 SPINK2P20155 84 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 SIM2Q14190 667 aaPredicted RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 PSMD5Q16401 504 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 AMHR2Q16671 573 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 FAM171A1Q5VUB5 890 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 HEATR6Q6AI08 1181 aaKnown RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 CD300LGQ6UXG3 332 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 SYNE3Q6ZMZ3 975 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 CEP57Q86XR8 500 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 CELF5Q8N6W0 485 aaKnown RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 ZNF713Q8N859 430 aaPredicted RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 RNF149Q8NC42 400 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 ETNPPLQ8TBG4 499 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 BORCS6Q96GS4 357 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 DHX33Q9H6R0 707 aaKnown RBP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 C6orf50Q9HD87 102 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 VPS54Q9P1Q0 977 aa9.66□□□□□ -0.86
AC055716.1-201ENST00000550077 A0A087WWV3 80 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 K7ESF4 209 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 PTGESO14684 152 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 TADA2AO75478 443 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 ECI2O75521 394 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 NPTXRO95502 500 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 C1RP00736 705 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 RHOP08100 348 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 CHRNB1P11230 501 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 ARF4P18085 180 aaPredicted RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 OR1D2P34982 312 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 CCR2P41597 374 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 MAGEA9P43362 315 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 PFKPQ01813 784 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 NAB2Q15742 525 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 PABPC1LQ4VXU2 614 aaKnown RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 FAM78AQ5JUQ0 283 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 Q6ZS52 159 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 FAM160A2Q8N612 972 aaPredicted RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 ASAP3Q8TDY4 903 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 TBCKQ8TEA7 893 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 NELL2Q99435 816 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 TTPALQ9BTX7 342 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 FAM126AQ9BYI3 521 aaPredicted RBP9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 CSRNP2Q9H175 543 aa9.65□□□□□ -0.86
AC055716.1-201ENST00000550077 GLT8D2Q9H1C3 349 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms