RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ST6GALNAC4Q9H4F1 302 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 DHX33Q9H6R0 707 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 TRMT13Q9NUP7 481 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 SAR1BQ9Y6B6 198 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 MROH7Q68CQ1 1323 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 CTAGE15A4D2H0 777 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 SPDYE4A6NLX3 237 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 B4GALT4O60513 344 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 TACC1O75410 805 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 CABYRO75952 493 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 CTAGE8P0CG41 777 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 EPHB4P54760 987 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 GTF2BQ00403 316 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 TARBP2Q15633 366 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 PLPPR4Q7Z2D5 763 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 CTAGE6Q86UF2 777 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 CTAGE4Q8IX94 777 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 TRIM58Q8NG06 486 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 SPAG5Q96R06 1193 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 KIFC3Q9BVG8 833 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 TMEM206Q9H813 350 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 C17orf75Q9HAS0 396 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 SCN5AQ14524 2016 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 UMODL1Q5DID0 1318 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 EMSYQ7Z589 1322 aa17.95■□□□□ 0.46
CHMP1A-204ENST00000547687 ANO9A1A5B4 782 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 SMTNP53814 917 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 LAMC2Q13753 1193 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 MYBPC2Q14324 1141 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC9A9Q8IVB4 645 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 TMEM161BQ8NDZ6 487 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 TMEM143Q96AN5 459 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 NTPCRQ9BSD7 190 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 MTG1Q9BT17 334 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 PARD6BQ9BYG5 372 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 ZNF446Q9NWS9 450 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 FHOD1Q9Y613 1164 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 CD4P01730 458 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 CYP2C18P33260 490 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC7A3Q8WY07 619 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 BBXQ8WY36 941 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 ACCSQ96QU6 501 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 SIX2Q9NPC8 291 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 LUC7LQ9NQ29 371 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 KMT5AQ9NQR1 393 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 GCNT4Q9P109 453 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 FBXL5Q9UKA1 691 aa17.94■□□□□ 0.46
CHMP1A-204ENST00000547687 EXOC3O60645 756 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 MOCS3O95396 460 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 SHHQ15465 462 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 ENOX2Q16206 610 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 TMCO3Q6UWJ1 677 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 IRF2BP2Q7Z5L9 587 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC17A8Q8NDX2 589 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 SPIRE2Q8WWL2 714 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 FAM167AQ96KS9 214 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 SMARCAD1Q9H4L7 1026 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 CYP2C9P11712 490 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 PPP2R5AQ15172 486 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC18A3Q16572 532 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 KAT2BQ92831 832 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 JRKLQ9Y4A0 524 aa17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 BZW2Q9Y6E2 419 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-204ENST00000547687 ADGRA3Q8IWK6 1321 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 DENND3A2RUS2 1198 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 TISP43B9A030 160 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 TLR3O15455 904 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 SRGAP2O75044 1071 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 TIMP1P01033 207 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 RFC5P40937 340 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 FMO5P49326 533 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 CBX1P83916 185 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 PPTC7Q8NI37 304 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 EMID1Q96A84 441 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 IFT74Q96LB3 600 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 TBX20Q9UMR3 447 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 CAPN6Q9Y6Q1 641 aa17.92■□□□□ 0.46
CHMP1A-204ENST00000547687 A0A1W2PPC1 479 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 RNF10Q8N5U6 811 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 RDH13Q8NBN7 331 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ALS2CR12Q96Q35 445 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ADAMTS1Q9UHI8 967 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 A0A087X0T9 212 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 MAFO75444 373 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC34A2O95436 690 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 LGALS2P05162 132 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 FAM228BP0C875 321 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms