RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 POMGNT1Q8WZA1 660 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 CLP1Q92989 425 aaKnown RBP22.7■■□□□ 1.22
SCARB1-211ENST00000546215 MSTO1Q9BUK6 570 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 KLK14Q9P0G3 267 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 KIAA1468Q9P260 1216 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 MAN1B1Q9UKM7 699 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 INPP5FQ9Y2H2 1132 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 MRPL42Q9Y6G3 142 aaKnown RBP22.7■■□□□ 1.22
SCARB1-211ENST00000546215 GARTP22102 1010 aa22.69■■□□□ 1.22
SCARB1-211ENST00000546215 SMYD4Q8IYR2 804 aaPredicted RBP22.69■■□□□ 1.22
SCARB1-211ENST00000546215 CCDC94Q9BW85 323 aaPredicted RBP22.69■■□□□ 1.22
SCARB1-211ENST00000546215 CXCL16Q9H2A7 254 aa22.69■■□□□ 1.22
SCARB1-211ENST00000546215 TYW1Q9NV66 732 aaKnown RBP22.69■■□□□ 1.22
SCARB1-211ENST00000546215 MIOSQ9NXC5 875 aa22.69■■□□□ 1.22
SCARB1-211ENST00000546215 HCSTQ9UBK5 93 aa22.69■■□□□ 1.22
SCARB1-211ENST00000546215 AGO2Q9UKV8 859 aaKnown RBP22.69■■□□□ 1.22
SCARB1-211ENST00000546215 MBD3O95983 291 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 ZBTB41Q5SVQ8 909 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 ALKAL1Q6UXT8 129 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 LRRC43Q8N309 656 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 GUF1Q8N442 669 aaKnown RBP22.68■■□□□ 1.22
SCARB1-211ENST00000546215 ACAP3Q96P50 834 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 MRPL9Q9BYD2 267 aaKnown RBP22.68■■□□□ 1.22
SCARB1-211ENST00000546215 NUP62CLQ9H1M0 184 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 KCTD10Q9H3F6 313 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 CWH43Q9H720 699 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 TBC1D13Q9NVG8 400 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 TRIP11Q15643 1979 aa22.68■■□□□ 1.22
SCARB1-211ENST00000546215 TMEM265A0A087WTH1 108 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 MEFVO15553 781 aaPredicted RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 CLTAP09496 248 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 TNFSF9P41273 254 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 SNRPFP62306 86 aaKnown RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 KYAT1Q16773 422 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 ISM2Q6H9L7 571 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 GPR153Q6NV75 609 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 URGCPQ8TCY9 931 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 TTYH1Q9H313 450 aaPredicted RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 ZNF576Q9H609 170 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 AGPAT3Q9NRZ7 376 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 KANSL3Q9P2N6 904 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 MYO9BQ13459 2157 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 CITO14578 2027 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 KIF20AO95235 890 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 POMCP01189 267 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 BMP6P22004 513 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 SCNN1GP51170 649 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 SLC10A6Q3KNW5 377 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 COBLL1Q53SF7 1204 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 XKR4Q5GH76 650 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 ARMCX5Q6P1M9 558 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 ZSWIM2Q8NEG5 633 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 TGS1Q96RS0 853 aaKnown RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 C17orf80Q9BSJ5 609 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 GTPBP4Q9BZE4 634 aaKnown RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 TOPORSQ9NS56 1045 aaPredicted RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 CPSF3Q9UKF6 684 aaKnown RBP22.67■■□□□ 1.22
SCARB1-211ENST00000546215 PLAGL2Q9UPG8 496 aa22.67■■□□□ 1.22
SCARB1-211ENST00000546215 PTGESO14684 152 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 PRCPP42785 496 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 ACOT2P49753 483 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 YARSP54577 528 aaKnown RBP22.66■■□□□ 1.22
SCARB1-211ENST00000546215 ERVK-21P61565 698 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 MORC3Q14149 939 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 CRELD2Q6UXH1 353 aaPredicted RBP22.66■■□□□ 1.22
SCARB1-211ENST00000546215 HS2ST1Q7LGA3 356 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 SNX27Q96L92 541 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 PCIF1Q9H4Z3 704 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 CGNQ9P2M7 1197 aaKnown RBP22.66■■□□□ 1.22
SCARB1-211ENST00000546215 TRANK1O15050 2925 aa22.66■■□□□ 1.22
SCARB1-211ENST00000546215 BIN1O00499 593 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 CLIC2O15247 247 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 ENOX2Q16206 610 aaKnown RBP22.65■■□□□ 1.22
SCARB1-211ENST00000546215 ZNF280BQ86YH2 543 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 SAAL1Q96ER3 474 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 RPS6KC1Q96S38 1066 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 NRDE2Q9H7Z3 1164 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 NLRC5Q86WI3 1866 aa22.65■■□□□ 1.22
SCARB1-211ENST00000546215 KIAA1671Q9BY89 1806 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 TDRD15B5MCY1 1934 aaKnown RBP22.64■■□□□ 1.22
SCARB1-211ENST00000546215 PDXKO00764 312 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 B4GALT3O60512 393 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 DDHD2O94830 711 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 ADRB2P07550 413 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 CXCL8P10145 99 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 BMPR1AP36894 532 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 RNASELQ05823 741 aaKnown RBP22.64■■□□□ 1.22
SCARB1-211ENST00000546215 C12orf56Q8IXR9 622 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 GOLGA5Q8TBA6 731 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 SEMA6BQ9H3T3 888 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 CERS4Q9HA82 394 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 HSPBP1Q9NZL4 362 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 CNTN3Q9P232 1028 aa22.64■■□□□ 1.22
SCARB1-211ENST00000546215 TTC26A0AVF1 554 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 KIAA0391O15091 583 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 LDHAP00338 332 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 POU5F1Q01860 360 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 GRIK3Q13003 919 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms