RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ST13P5Q8NFI4 369 aaPredicted RBP17.96■□□□□ 0.47
DDX55-212ENST00000544738 STAMQ92783 540 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 VN1R3Q9BXE9 311 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 WDR6Q9NNW5 1121 aaKnown RBP17.96■□□□□ 0.47
DDX55-212ENST00000544738 KIF3AQ9Y496 699 aa17.96■□□□□ 0.47
DDX55-212ENST00000544738 C2CD2LO14523 706 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 TSPAN1O60635 241 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 USO1O60763 962 aaKnown RBP17.95■□□□□ 0.46
DDX55-212ENST00000544738 ITGA4P13612 1032 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 MUTP22033 750 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 RPA1P27694 616 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 SLC11A1P49279 550 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 CAPSQ13938 189 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 RABEP1Q15276 862 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 TTC38Q5R3I4 469 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 MAML2Q8IZL2 1156 aaPredicted RBP17.95■□□□□ 0.46
DDX55-212ENST00000544738 GPR161Q8N6U8 529 aaKnown RBP17.95■□□□□ 0.46
DDX55-212ENST00000544738 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 NXPE3Q969Y0 559 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 FAM193BQ96PV7 902 aaPredicted RBP17.95■□□□□ 0.46
DDX55-212ENST00000544738 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 MAN1C1Q9NR34 630 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 SPATA6Q9NWH7 488 aaPredicted RBP17.95■□□□□ 0.46
DDX55-212ENST00000544738 EPS15L1Q9UBC2 864 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 DNAJB4Q9UDY4 337 aa17.95■□□□□ 0.46
DDX55-212ENST00000544738 ALDH2P05091 517 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 GLRA2P23416 452 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDX55-212ENST00000544738 MBTD1Q05BQ5 628 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 HAUS3Q68CZ6 603 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 HACE1Q8IYU2 909 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 PJA1Q8NG27 643 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 ATRIPQ8WXE1 791 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
DDX55-212ENST00000544738 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
DDX55-212ENST00000544738 MRPL17Q9NRX2 175 aaKnown RBP17.94■□□□□ 0.46
DDX55-212ENST00000544738 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
DDX55-212ENST00000544738 A0A087WWV3 80 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 PRR5-ARHGAP8B1AHC4 643 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 LAMTOR5O43504 91 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 MED24O75448 989 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 ARHGAP8P85298 464 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 CSTF1Q05048 431 aaKnown RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 ZNF280BQ86YH2 543 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 SMG8Q8ND04 991 aaKnown RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 CMASQ8NFW8 434 aaPredicted RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 SMG7Q92540 1137 aaKnown RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 TMEM175Q9BSA9 504 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 TRIM6Q9C030 488 aaPredicted RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 UPF2Q9HAU5 1272 aaKnown RBP17.93■□□□□ 0.46
DDX55-212ENST00000544738 USP18Q9UMW8 372 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 FAN1Q9Y2M0 1017 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 IPPQ9Y573 584 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 CLUHO75153 1309 aa17.93■□□□□ 0.46
DDX55-212ENST00000544738 DENND4AQ7Z401 1863 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 INPPL1O15357 1258 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 LILRB3O75022 631 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 RFPL2O75678 378 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
DDX55-212ENST00000544738 FXR2P51116 673 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDX55-212ENST00000544738 LMNB2Q03252 620 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 PDIA5Q14554 519 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 AMHR2Q16671 573 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 SLC27A1Q6PCB7 646 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 SHDQ96IW2 340 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 CPB2Q96IY4 423 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 EIF2AQ9BY44 585 aaKnown RBP17.92■□□□□ 0.46
DDX55-212ENST00000544738 RAB34Q9BZG1 259 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 PIDD1Q9HB75 910 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 BAHCC1Q9P281 2608 aa17.92■□□□□ 0.46
DDX55-212ENST00000544738 ARHGEF35A5YM69 484 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 LRRIQ4A6NIV6 560 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 SPTLC1O15269 473 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 DDHD2O94830 711 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 POMCP01189 267 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 SPATA31D3P0C874 917 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 LAMP2P13473 410 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 SPATA31D4Q6ZUB0 917 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 MAEAQ7L5Y9 396 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 ZBTB8OSQ8IWT0 167 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 C4orf32Q8N8J7 132 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 RTKNQ9BST9 563 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 BCO2Q9BYV7 579 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 PRMT7Q9NVM4 692 aaPredicted RBP17.91■□□□□ 0.46
DDX55-212ENST00000544738 DAXXQ9UER7 740 aaPredicted RBP17.91■□□□□ 0.46
DDX55-212ENST00000544738 LRWD1Q9UFC0 647 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 GIT1Q9Y2X7 761 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 USP24Q9UPU5 2620 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 ATRXP46100 2492 aa17.91■□□□□ 0.46
DDX55-212ENST00000544738 C2orf16Q68DN1 1984 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 FANCMQ8IYD8 2048 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 A0A1B0GUA9 196 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 ARL5CA6NH57 179 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 LAD1O00515 517 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 NRP1O14786 923 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 B4GALT3O60512 393 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 NR1I2O75469 434 aa17.9■□□□□ 0.46
DDX55-212ENST00000544738 ADRB1P08588 477 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms