RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KCTD10Q9H3F6 313 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 PCIF1Q9H4Z3 704 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 TYW1Q9NV66 732 aaKnown RBP14.87□□□□□ -0.03
SP140-213ENST00000543928 KLK14Q9P0G3 267 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 TMEM63CQ9P1W3 806 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 MSRAQ9UJ68 235 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 YBX2Q9Y2T7 364 aaKnown RBP14.87□□□□□ -0.03
SP140-213ENST00000543928 GIT1Q9Y2X7 761 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 COL4A6Q14031 1691 aa14.87□□□□□ -0.03
SP140-213ENST00000543928 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 LAMA3Q16787 3333 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 ARL5CA6NH57 179 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 PDXKO00764 312 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 CLIC2O15247 247 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 FAM189A1O60320 539 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 CA3P07451 260 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 CLTAP09496 248 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 TNFSF9P41273 254 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 ACOT2P49753 483 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 YARSP54577 528 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 KYAT1Q16773 422 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 KLHL40Q2TBA0 621 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 COBLL1Q53SF7 1204 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 CMTR2Q8IYT2 770 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 ADSSL1Q8N142 457 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 ZSWIM2Q8NEG5 633 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 GOLGA5Q8TBA6 731 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 SAAL1Q96ER3 474 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 ZFP42Q96MM3 310 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 NKX2-4Q9H2Z4 354 aa14.86□□□□□ -0.03
SP140-213ENST00000543928 CGNQ9P2M7 1197 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 LAMA2P24043 3122 aaKnown RBP14.86□□□□□ -0.03
SP140-213ENST00000543928 GOLGA8IPA6NC78 632 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 GOLGA8JA6NMD2 632 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 DNAJB2P25686 324 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 CYP2J2P51589 502 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 STIM1Q13586 685 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 NOMO2Q5JPE7 1267 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 FIBCD1Q8N539 461 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 URGCPQ8TCY9 931 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 NOC3LQ8WTT2 800 aaKnown RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 SYAP1Q96A49 352 aaPredicted RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 RPS6KC1Q96S38 1066 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 FAM213AQ9BRX8 229 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 MRPL9Q9BYD2 267 aaKnown RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 CXCL16Q9H2A7 254 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 SEMA6BQ9H3T3 888 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 TOPORSQ9NS56 1045 aaPredicted RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 HSPBP1Q9NZL4 362 aa14.85□□□□□ -0.03
SP140-213ENST00000543928 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
SP140-213ENST00000543928 PPP1R3GB7ZBB8 358 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 SOX1O00570 391 aaPredicted RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 PSMA7O14818 248 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 KIAA0391O15091 583 aaKnown RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 INPPL1O15357 1258 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 MEFVO15553 781 aaPredicted RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 CALUO43852 315 aaPredicted RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 EXTL3O43909 919 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 ARHGEF15O94989 841 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 LDHAP00338 332 aaKnown RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 POMCP01189 267 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 CXCL8P10145 99 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 PPP1R2P41236 205 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 SCNN1GP51170 649 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 ENOX2Q16206 610 aaKnown RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 SLC10A6Q3KNW5 377 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 CRELD2Q6UXH1 353 aaPredicted RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 LRRC55Q6ZSA7 311 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 C12orf56Q8IXR9 622 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 LRRC43Q8N309 656 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 GPD1LQ8N335 351 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 GSTCDQ8NEC7 633 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 RSPH1Q8WYR4 309 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 TIFAQ96CG3 184 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 SNX27Q96L92 541 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 RPF1Q9H9Y2 349 aaKnown RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 TBC1D13Q9NVG8 400 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 MIOSQ9NXC5 875 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 KANSL3Q9P2N6 904 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 HCSTQ9UBK5 93 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
SP140-213ENST00000543928 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
SP140-213ENST00000543928 CITO14578 2027 aa14.83□□□□□ -0.03
SP140-213ENST00000543928 LINC01553A4QN01 128 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 PTGESO14684 152 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 NR3C1P04150 777 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 RNASELQ05823 741 aaKnown RBP14.83□□□□□ -0.04
SP140-213ENST00000543928 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
SP140-213ENST00000543928 ZCWPW2Q504Y3 356 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 HABP4Q5JVS0 413 aaKnown RBP14.83□□□□□ -0.04
SP140-213ENST00000543928 GLRA4Q5JXX5 417 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 CENPPQ6IPU0 288 aa14.83□□□□□ -0.04
SP140-213ENST00000543928 KLHL10Q6JEL2 608 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms