RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CITO14578 2027 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 TRIP11Q15643 1979 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 ATG2AQ2TAZ0 1938 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 A0A0B4J269 797 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
CD9-210ENST00000543916 FAM189A1O60320 539 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 B4GALT3O60512 393 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 RHOBTB3O94955 611 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 SCNN1GP51170 649 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 PSMD2Q13200 908 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 KCNB1Q14721 858 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 GRIN2CQ14957 1233 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 ZBTB41Q5SVQ8 909 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 GSTCDQ8NEC7 633 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 URGCPQ8TCY9 931 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 RSPH1Q8WYR4 309 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 MRPL9Q9BYD2 267 aaKnown RBP16.5■□□□□ 0.23
CD9-210ENST00000543916 STYXL1Q9Y6J8 313 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 ANK1P16157 1881 aa16.5■□□□□ 0.23
CD9-210ENST00000543916 UBE4BO95155 1302 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 RFXAPO00287 272 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 PTGESO14684 152 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 POMCP01189 267 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 ADSSP30520 456 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 CTNNB1P35222 781 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 BMT2Q1RMZ1 405 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 SPOUT1Q5T280 376 aaKnown RBP16.49■□□□□ 0.23
CD9-210ENST00000543916 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 NELFCDQ8IXH7 590 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
CD9-210ENST00000543916 COLGALT1Q8NBJ5 622 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
CD9-210ENST00000543916 PRDM12Q9H4Q4 367 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 TMEM206Q9H813 350 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
CD9-210ENST00000543916 OGTO15294 1046 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 DDHD2O94830 711 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 BMPR1AP36894 532 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 PBX3P40426 434 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 TNFSF9P41273 254 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
CD9-210ENST00000543916 FBXO22Q8NEZ5 403 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 CCDC47Q96A33 483 aaKnown RBP16.48■□□□□ 0.23
CD9-210ENST00000543916 SNX27Q96L92 541 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 GUCD1Q96NT3 240 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 NRDE2Q9H7Z3 1164 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 DNAJB4Q9UDY4 337 aa16.48■□□□□ 0.23
CD9-210ENST00000543916 HOOK1Q9UJC3 728 aaKnown RBP16.48■□□□□ 0.23
CD9-210ENST00000543916 C5orf67F2Z3F1 127 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 TGFB1I1O43294 461 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 ZC3H11AO75152 810 aaKnown RBP eCLIP16.47■□□□□ 0.23
CD9-210ENST00000543916 LAG3P18627 525 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 ZSWIM2Q8NEG5 633 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 POMGNT1Q8WZA1 660 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 ACAP3Q96P50 834 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 RPS6KC1Q96S38 1066 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 CBWD1Q9BRT8 395 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 AGO2Q9UKV8 859 aaKnown RBP16.47■□□□□ 0.23
CD9-210ENST00000543916 RWDD3Q9Y3V2 267 aa16.47■□□□□ 0.23
CD9-210ENST00000543916 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 SMC2O95347 1197 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 CLTAP09496 248 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 CXCL8P10145 99 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 GARTP22102 1010 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 ACOT2P49753 483 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 YARSP54577 528 aaKnown RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 BCAR1P56945 870 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 DSC1Q08554 894 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 GRIK3Q13003 919 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 NAB2Q15742 525 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 ENOX2Q16206 610 aaKnown RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 SLC10A6Q3KNW5 377 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 GLRA4Q5JXX5 417 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 KCNT2Q6UVM3 1135 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 SMYD4Q8IYR2 804 aaPredicted RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 GPT2Q8TD30 523 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 ZNF558Q96NG5 402 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 PCIF1Q9H4Z3 704 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
CD9-210ENST00000543916 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.23
CD9-210ENST00000543916 NT5C1B-RDH14C9J2C7 533 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 H3BNC9 293 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms