RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 AGPAT1Q99943 283 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 VIPAS39Q9H9C1 493 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 SSU72P8A0A1W2PR75 194 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM259Q4ZIN3 620 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 MTRQ99707 1265 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 SCOCQ9UIL1 159 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZFP69BQ9UJL9 534 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 PRPSAP2O60256 369 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 KDSRQ06136 332 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 GRB10Q13322 594 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 HNRNPLLQ8WVV9 542 aaKnown RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAM49AQ9H0Q0 323 aaPredicted RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 PDE2AO00408 941 aaPredicted RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CSPG5O95196 566 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CPA2P48052 419 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 IL1RL1Q01638 556 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 JAMLQ86YT9 394 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CEP120Q8N960 986 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 SHISA4Q96DD7 197 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAM20AQ96MK3 541 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 XPO6Q96QU8 1125 aaKnown RBP13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 NAGPAQ9UK23 515 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 COPEO14579 308 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 SH3BP5O60239 455 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 SKIP12755 728 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CHRNA3P32297 505 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 FMO5P49326 533 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 ARSEP51690 589 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 LCA5Q86VQ0 697 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 CDKL2Q92772 493 aa13.76□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 PFDN1O60925 122 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 RBBP5Q15291 538 aaKnown RBP13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 FBXO25Q8TCJ0 367 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 EXT2Q93063 718 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 VPS11Q9H270 941 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 IKZF4Q9H2S9 585 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SHMT1P34896 483 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 DGKZQ13574 1117 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 PTGISQ16647 500 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 ERP27Q96DN0 273 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SKAP2O75563 359 aaPredicted RBP13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 LUC7L3O95232 432 aaKnown RBP13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 NAB2Q15742 525 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 ERGIC2Q96RQ1 377 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 SHCBP1LQ9BZQ2 653 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 MIS12Q9H081 205 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 NPHS2Q9NP85 383 aa13.75□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM150BA6NC51 233 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 MED24O75448 989 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 QARSP47897 775 aaKnown RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 BYSLQ13895 437 aaKnown RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 SEPT6Q14141 434 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 CEP55Q53EZ4 464 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 CATSPER3Q86XQ3 398 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 RHPN2Q8IUC4 686 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 EPS8L3Q8TE67 593 aaKnown RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 USP20Q9Y2K6 914 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 CSADQ9Y600 493 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 GRAP2O75791 330 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 TJP3O95049 919 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 MYBL2P10244 700 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 GNA15P30679 374 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 NOP14P78316 857 aaKnown RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 PDIA5Q14554 519 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 KRT39Q6A163 491 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 CIAPIN1Q6FI81 312 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 RBM15Q96T37 977 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■■■□ 22.9
TUBGCP2-210ENST00000543663 MYO3BQ8WXR4 1341 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms