RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	SASS6	Q6UVJ0	657 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	CBWD2	Q8IUF1	395 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	TMEM130	Q8N3G9	435 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	TOP1MT	Q969P6	601 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	SAAL1	Q96ER3	474 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	MSTO1	Q9BUK6	570 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	C1orf112	Q9NSG2	853 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	MIOS	Q9NXC5	875 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	CGN	Q9P2M7	1197 aa	Known RBP	11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	AGO2	Q9UKV8	859 aa	Known RBP	11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	TRIOBP	Q9H2D6	2365 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	REV3L	O60673	3130 aa		11.65	□□□□□ -0.54
NPIPB3-210	ENST00000542817	TTC26	A0AVF1	554 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	EXTL3	O43909	919 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	B4GALT3	O60512	393 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	RECQL4	O94761	1208 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	EOMES	O95936	686 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	LINC00271	P0C7V0	271 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	HARS	P12081	509 aa	Known RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	BMP8B	P34820	402 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	OSTN	P61366	133 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	MLLT1	Q03111	559 aa	Predicted RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	LRRC63	Q05C16	580 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	NAB2	Q15742	525 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SCARA3	Q6AZY7	606 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SLFN12L	Q6IEE8	588 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ARMCX5	Q6P1M9	558 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	HS2ST1	Q7LGA3	356 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	DHX40	Q8IX18	779 aa	Known RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	THNSL1	Q8IYQ7	743 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GOLGA5	Q8TBA6	731 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	POMGNT1	Q8WZA1	660 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ZNF689	Q96CS4	500 aa	Predicted RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	FAM84A	Q96KN4	292 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ZMAT2	Q96NC0	199 aa	Known RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	FAM213A	Q9BRX8	229 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	TCHP	Q9BT92	498 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ELAC1	Q9H777	363 aa	Known RBP	11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	TMEM161A	Q9NX61	479 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	PLAGL2	Q9UPG8	496 aa		11.64	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	PTGES	O14684	152 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	OFD1	O75665	1012 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	KIF20A	O95235	890 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CCDC192	P0DO97	292 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CXCL8	P10145	99 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	FGFR1	P11362	822 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	NR2F2	P24468	414 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	PPP1R2	P41236	205 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	RAB27A	P51159	221 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CYP2J2	P51589	502 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	NCBP1	Q09161	790 aa	Known RBP	11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ADAM9	Q13443	819 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	LRSAM1	Q6UWE0	723 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GAS2L3	Q86XJ1	694 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	NPAS4	Q8IUM7	802 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	XXYLT1	Q8NBI6	393 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ENOX1	Q8TC92	643 aa	Known RBP	11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SNX27	Q96L92	541 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	MFSD14A	Q96MC6	490 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ZFP42	Q96MM3	310 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CASD1	Q96PB1	797 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	BPIFA3	Q9BQP9	254 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	RTN4	Q9NQC3	1192 aa	Known RBP	11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	KLK14	Q9P0G3	267 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	PTPRJ	Q12913	1337 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	EYS	Q5T1H1	3165 aa		11.63	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ARL5C	A6NH57	179 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GRXCR1	A8MXD5	290 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	LACTBL1	A8MY62	500 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CALU	O43852	315 aa	Predicted RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	EFCAB14	O75071	495 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	DGKI	O75912	1065 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ARHGEF15	O94989	841 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CLTA	P09496	248 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	KCNE1	P15382	129 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ZNF18	P17022	549 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	IGFBP6	P24592	240 aa	Predicted RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	HTRA4	P83105	476 aa	Predicted RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	FKBP3	Q00688	224 aa	Known RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	POU5F1	Q01860	360 aa	Known RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	STIM1	Q13586	685 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ZBTB6	Q15916	424 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SNRNP35	Q16560	246 aa	Known RBP	11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	TMEM132A	Q24JP5	1023 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CDKAL1	Q5VV42	579 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	BRSK2	Q8IWQ3	736 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	EFCAB13	Q8IY85	973 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GPD1L	Q8N335	351 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	CXorf38	Q8TB03	319 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GAD1	Q99259	594 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	ADPGK	Q9BRR6	497 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	APOL6	Q9BWW8	343 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	HCST	Q9UBK5	93 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	GIT1	Q9Y2X7	761 aa		11.62	□□□□□ -0.55
NPIPB3-210	ENST00000542817	SMIM28	A0A1B0GU29	152 aa		11.61	□□□□□ -0.55
NPIPB3-210	ENST00000542817	BICDL2	A1A5D9	508 aa		11.61	□□□□□ -0.55
NPIPB3-210	ENST00000542817	KIAA0391	O15091	583 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms