RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 THEMIS2Q5TEJ8 643 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 KRT79Q5XKE5 535 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 CAPRIN2Q6IMN6 1127 aaKnown RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 HOOK3Q86VS8 718 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 EGFL6Q8IUX8 553 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ERP44Q9BS26 406 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 SLC38A10Q9HBR0 1119 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 SIX2Q9NPC8 291 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 RNF146Q9NTX7 359 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TAS2R14Q9NYV8 317 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 GRHL1Q9NZI5 618 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ADAM22Q9P0K1 906 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 SUCLA2Q9P2R7 463 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 CTNNAL1Q9UBT7 734 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 NKX1-2Q9UD57 310 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 LAMA3Q16787 3333 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 KIAA0391O15091 583 aaKnown RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 WDR46O15213 610 aaKnown RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 EVI5O60447 810 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ATP9AO75110 1047 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 GH1P01241 217 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 H2AFZP0C0S5 128 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 RPL21P46778 160 aaKnown RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 CASP4P49662 377 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 PTENP60484 403 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ADCY1Q08828 1119 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ANKRD20A2Q5SQ80 823 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TMEM63BQ5T3F8 832 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ANKRD20A1Q5TYW2 823 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ANKRD20A3Q5VUR7 823 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TTC27Q6P3X3 843 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 SEPT14Q6ZU15 432 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 H2AFVQ71UI9 128 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TAX1BP1Q86VP1 789 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 CPNE8Q86YQ8 564 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 GLYCTKQ8IVS8 523 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 KSR1Q8IVT5 923 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 ZMYND8Q9ULU4 1186 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 ICAM1P05362 532 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 KRT13P13646 458 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 MGAT5Q09328 741 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
THBS3-211ENST00000541990 LONRF1Q17RB8 773 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 GALNTL6Q49A17 601 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 TCERG1LQ5VWI1 586 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 FITM2Q8N6M3 262 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 GDAP1Q8TB36 358 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 KLHL29Q96CT2 875 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 PGM2Q96G03 612 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 DDX23Q9BUQ8 820 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 DAAM1Q9Y4D1 1078 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 LAMA2P24043 3122 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 TCRBV7S2A1N4TA0A589 114 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 CFAP73A6NFT4 308 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 AKAP3O75969 853 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 CELF2O95319 508 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 HOXD13P35453 343 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 EIF3BP55884 814 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 AUHQ13825 339 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 TRIM68Q6AZZ1 485 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 CGB2Q6NT52 195 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 EXOC3L1Q86VI1 746 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 NCAPG2Q86XI2 1143 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 ANKRD42Q8N9B4 389 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 SLC35G2Q8TBE7 412 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 SYTL5Q8TDW5 730 aaPredicted RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 PPP1R13LQ8WUF5 828 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 KRT35Q92764 455 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 UTP4Q969X6 686 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 CEP63Q96MT8 703 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 POP1Q99575 1024 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 WRAP73Q9P2S5 460 aaPredicted RBP9.8□□□□□ -0.84
THBS3-211ENST00000541990 COG5Q9UP83 839 aa9.8□□□□□ -0.84
THBS3-211ENST00000541990 NT5C2P49902 561 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 MARSP56192 900 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 MRPS9P82933 396 aaKnown RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 KCNA1Q09470 495 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 SNX1Q13596 522 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 MPP2Q14168 576 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 COG2Q14746 738 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 EXOC3L4Q17RC7 722 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 TMEM266Q2M3C6 531 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 GPBP1Q86WP2 473 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 TPH2Q8IWU9 490 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 AMFRQ9UKV5 643 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 ZNF214Q9UL59 606 aaPredicted RBP9.79□□□□□ -0.84
THBS3-211ENST00000541990 MSH2P43246 934 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 BNIP1Q12981 228 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 PSMD2Q13200 908 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 EPHA7Q15375 998 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 NUGGCQ68CJ6 796 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 RNF207Q6ZRF8 634 aa9.79□□□□□ -0.84
THBS3-211ENST00000541990 CATSPERGQ6ZRH7 1159 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms