RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 LIMA1Q9UHB6 759 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
ATL3-204ENST00000540699 UBE4BO95155 1302 aa11.59□□□□□ -0.55
ATL3-204ENST00000540699 PDCD11Q14690 1871 aaKnown RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 K7ERI5 159 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 SLC16A4O15374 487 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 B4GALT5O43286 388 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 KIF20AO95235 890 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 NMT1P30419 496 aaKnown RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 ABCD1P33897 745 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 GTF2BQ00403 316 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 SPAG1Q07617 926 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 ADGRE1Q14246 886 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 TPD52L1Q16890 204 aaPredicted RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 HSP90AA4PQ58FG1 418 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 LRRC55Q6ZSA7 311 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 ZNF720Q7Z2F6 126 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 HAUS6Q7Z4H7 955 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 ZNF598Q86UK7 904 aaKnown RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 FAM178BQ8IXR5 827 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 MYCT1Q8N699 235 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 TMEM161AQ9NX61 479 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 PCDHA11Q9Y5I1 949 aa11.58□□□□□ -0.56
ATL3-204ENST00000540699 TDRD15B5MCY1 1934 aaKnown RBP11.58□□□□□ -0.56
ATL3-204ENST00000540699 ZMYM2Q9UBW7 1377 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 KCNJ18B7U540 433 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 EOMESO95936 686 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 SERPINC1P01008 464 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 PIGRP01833 764 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 SKIP12755 728 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 RAB27AP51159 221 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 RABGGTBP53611 331 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 UBASH3AP57075 661 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 NCBP1Q09161 790 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 PRPF4BQ13523 1007 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 KCNJ12Q14500 433 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 KRT31Q15323 416 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 KNOP1Q1ED39 458 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 EDRF1Q3B7T1 1238 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 TWF2Q6IBS0 349 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 TMCO2Q7Z6W1 182 aaPredicted RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 MRPL10Q7Z7H8 261 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 CSGALNACT2Q8N6G5 542 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 ZNF689Q96CS4 500 aaPredicted RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 ASB2Q96Q27 587 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 RAD9AQ99638 391 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 SRRTQ9BXP5 876 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 SLC28A3Q9HAS3 691 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 PTPRHQ9HD43 1115 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 FAM105AQ9NUU6 356 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 RNF19AQ9NV58 838 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 TNFSF13BQ9Y275 285 aa11.57□□□□□ -0.56
ATL3-204ENST00000540699 PRRC2BQ5JSZ5 2229 aaKnown RBP11.57□□□□□ -0.56
ATL3-204ENST00000540699 COL4A4P53420 1690 aaPredicted RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 PDXKO00764 312 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 ABLIM1O14639 778 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 N4BP3O15049 544 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 DGKIO75912 1065 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 PRPF6O94906 941 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 GCNT3O95395 438 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 MYOGP15173 224 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 ANK1P16157 1881 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 PROZP22891 400 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 PBX1P40424 430 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 ALCAMQ13740 583 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 NR1I3Q14994 352 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 NFIL3Q16649 462 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 HS1BP3Q53T59 392 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 SLC27A1Q6PCB7 646 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 ZPBP2Q6X784 338 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 MAP4K3Q8IVH8 894 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 CPB2Q96IY4 423 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 CEP63Q96MT8 703 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 ACO2Q99798 780 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 TSG101Q99816 390 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 MRPL4Q9BYD3 311 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 TYW1Q9NV66 732 aaKnown RBP11.56□□□□□ -0.56
ATL3-204ENST00000540699 TBX20Q9UMR3 447 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 INSL6Q9Y581 213 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms