RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
MDM1-210ENST00000540418 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 YARSP54577 528 aaKnown RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 TMEM192Q8IY95 271 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 CLP1Q92989 425 aaKnown RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 CLTAP09496 248 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 TGS1Q96RS0 853 aaKnown RBP16.29■□□□□ 0.2
MDM1-210ENST00000540418 ZNF576Q9H609 170 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 FAM189A1O60320 539 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 MBD3O95983 291 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 ERVK-21P61565 698 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 SEZ6Q53EL9 994 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 CWH43Q9H720 699 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 TOPORSQ9NS56 1045 aaPredicted RBP16.28■□□□□ 0.2
MDM1-210ENST00000540418 TBC1D13Q9NVG8 400 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 MIOSQ9NXC5 875 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 KIAA1468Q9P260 1216 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
MDM1-210ENST00000540418 MAN1B1Q9UKM7 699 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 POMCP01189 267 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 LINC00271P0C7V0 271 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
MDM1-210ENST00000540418 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 SAMD11Q96NU1 681 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 RWDD3Q9Y3V2 267 aa16.28■□□□□ 0.2
MDM1-210ENST00000540418 KIAA0391O15091 583 aaKnown RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 GOLGA5Q8TBA6 731 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 CBWD1Q9BRT8 395 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 KCTD10Q9H3F6 313 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 AGPAT3Q9NRZ7 376 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 BMPR1AP36894 532 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 SCNN1GP51170 649 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 XKR4Q5GH76 650 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 ZBTB41Q5SVQ8 909 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 C17orf80Q9BSJ5 609 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 TTYH1Q9H313 450 aaPredicted RBP16.27■□□□□ 0.2
MDM1-210ENST00000540418 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 PLEKHA5Q9HAU0 1116 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 AAASQ9NRG9 546 aa16.27■□□□□ 0.2
MDM1-210ENST00000540418 TNFSF9P41273 254 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 ACOT2P49753 483 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 POU5F1Q01860 360 aaKnown RBP16.26■□□□□ 0.19
MDM1-210ENST00000540418 SLC10A6Q3KNW5 377 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
MDM1-210ENST00000540418 SNX27Q96L92 541 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 PCIF1Q9H4Z3 704 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 RPF1Q9H9Y2 349 aaKnown RBP16.26■□□□□ 0.19
MDM1-210ENST00000540418 HCSTQ9UBK5 93 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 PDXKO00764 312 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 MORC3Q14149 939 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 SPRED2Q7Z698 418 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 ZNF280BQ86YH2 543 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 FAM193BQ96PV7 902 aaPredicted RBP16.26■□□□□ 0.19
MDM1-210ENST00000540418 NRDE2Q9H7Z3 1164 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 CERS4Q9HA82 394 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 GBF1Q92538 1859 aa16.26■□□□□ 0.19
MDM1-210ENST00000540418 PTGESO14684 152 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 DDHD2O94830 711 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 RB1P06400 928 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 THP07101 528 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 LAG3P18627 525 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 PRCPP42785 496 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 GRIK3Q13003 919 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 ENOX2Q16206 610 aaKnown RBP16.25■□□□□ 0.19
MDM1-210ENST00000540418 CRELD2Q6UXH1 353 aaPredicted RBP16.25■□□□□ 0.19
MDM1-210ENST00000540418 C12orf56Q8IXR9 622 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 FAM213AQ9BRX8 229 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 PLVAPQ9BX97 442 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 CNTN3Q9P232 1028 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 PCDHB12Q9Y5F1 795 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 SMIM28A0A1B0GU29 152 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 C5orf67F2Z3F1 127 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 BIN1O00499 593 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 CLIC2O15247 247 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
MDM1-210ENST00000540418 EXTL3O43909 919 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 ADRB2P07550 413 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 CXCL8P10145 99 aa16.25■□□□□ 0.19
MDM1-210ENST00000540418 KCNE1P15382 129 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms