RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 KRT16P08779 473 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 PDE6CP51160 858 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 KYNUQ16719 465 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 CYP4X1Q8N118 509 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 TACO1Q9BSH4 297 aaKnown RBP21.75■■□□□ 1.07
TMEM260-203ENST00000539559 NSRP1Q9H0G5 558 aaKnown RBP21.75■■□□□ 1.07
TMEM260-203ENST00000539559 CCDC134Q9H6E4 229 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 ASIC3Q9UHC3 531 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 KRT17Q04695 432 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 CALCOCO2Q13137 446 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 SLMAPQ14BN4 828 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 TAOK1Q7L7X3 1001 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 DAW1Q8N136 415 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 ZNF564Q8TBZ8 553 aaPredicted RBP21.75■■□□□ 1.07
TMEM260-203ENST00000539559 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 RMDN2Q96LZ7 410 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 CHST7Q9NS84 486 aa21.75■■□□□ 1.07
TMEM260-203ENST00000539559 PASKQ96RG2 1323 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 GAS7O60861 476 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PSMD10O75832 226 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 FOSP01100 380 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-203ENST00000539559 ARP10275 920 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PSEN1P49768 467 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PPP2R5AQ15172 486 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PPM1KQ8N3J5 372 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 EPS8L1Q8TE68 723 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 CD101Q93033 1021 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 MKL1Q969V6 931 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 FAM84AQ96KN4 292 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 TRIM7Q9C029 511 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 NYAP2Q9P242 653 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PARP2Q9UGN5 583 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 ECEL1O95672 775 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 OAS1P00973 400 aaKnown RBP21.74■■□□□ 1.07
TMEM260-203ENST00000539559 RRP1BQ14684 758 aaKnown RBP21.74■■□□□ 1.07
TMEM260-203ENST00000539559 CCDC174Q6PII3 467 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 MIGA2Q7L4E1 593 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PRUNE1Q86TP1 453 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 ZNF653Q96CK0 615 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 HERPUD2Q9BSE4 406 aa21.74■■□□□ 1.07
TMEM260-203ENST00000539559 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-203ENST00000539559 EIF4E1BA6NMX2 242 aaKnown RBP21.73■■□□□ 1.07
TMEM260-203ENST00000539559 CETPP11597 493 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 VAMP7P51809 220 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 MAP2K1Q02750 393 aaPredicted RBP21.73■■□□□ 1.07
TMEM260-203ENST00000539559 EPC2Q52LR7 807 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 C2CD6Q53TS8 623 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 FITM2Q8N6M3 262 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 KLHL29Q96CT2 875 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 UNC45AQ9H3U1 944 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 MTUS1Q9ULD2 1270 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 RTN2O75298 545 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 C1orf220Q5T0J3 134 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 LLGL2Q6P1M3 1020 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 HOMER3Q9NSC5 361 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 A0A1W2PRG0 241 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 DIAPH2O60879 1101 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 HSPA6P17066 643 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 KREMEN1Q96MU8 473 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 LXNQ9BS40 222 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 TMEM109Q9BVC6 243 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 WNT8AQ9H1J5 351 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 TUFT1Q9NNX1 390 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 SERPINA10Q9UK55 444 aa21.73■■□□□ 1.07
TMEM260-203ENST00000539559 GREB1LQ9C091 1923 aaPredicted RBP21.72■■□□□ 1.07
TMEM260-203ENST00000539559 TMEM150BA6NC51 233 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 ZNF131P52739 623 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 HADHBP55084 474 aaKnown RBP21.72■■□□□ 1.07
TMEM260-203ENST00000539559 NFIL3Q16649 462 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 RPS6KC1Q96S38 1066 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 FAM198AQ9UFP1 575 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 NOCTQ9UK39 431 aaKnown RBP21.72■■□□□ 1.07
TMEM260-203ENST00000539559 PRR12Q9ULL5 1215 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 GH2P01242 217 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 BMP3P12645 472 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 BRAFP15056 766 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 PRELPP51888 382 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 GRIPAP1Q4V328 841 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 SGO2Q562F6 1265 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 MFSD5Q6N075 450 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 DEFB132Q7Z7B7 95 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 DHX38Q92620 1227 aaKnown RBP21.72■■□□□ 1.07
TMEM260-203ENST00000539559 STMN4Q9H169 189 aaPredicted RBP21.72■■□□□ 1.07
TMEM260-203ENST00000539559 EBF2Q9HAK2 575 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
TMEM260-203ENST00000539559 ARHGEF35A5YM69 484 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 FMO1Q01740 532 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 MGAT5Q09328 741 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 ZNF268Q14587 947 aaPredicted RBP21.71■■□□□ 1.07
TMEM260-203ENST00000539559 CYP1B1Q16678 543 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 CGB2Q6NT52 195 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 ERICH1Q86X53 443 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 SLC24A3Q9HC58 644 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 C15orf41Q9Y2V0 281 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 CFAP73A6NFT4 308 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 SUN1O94901 812 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 CYP3A4P08684 503 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms