RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 SLX4Q8IY92 1834 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 TISP43B9A030 160 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 IPO5O00410 1097 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 CYP26A1O43174 497 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 ATMINO43313 823 aaPredicted RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 TCEA3O75764 348 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 NPR1P16066 1061 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 RBM5P52756 815 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDH13-204ENST00000539548 UBXN2AP68543 259 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 RRP1BQ14684 758 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 E2F5Q15329 346 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 LONRF1Q17RB8 773 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 FAM133BQ5BKY9 247 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 VSTM1Q6UX27 236 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 TBC1D1Q86TI0 1168 aaPredicted RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 CPNE8Q86YQ8 564 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 GBP7Q8N8V2 638 aaPredicted RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 CCHCR1Q8TD31 782 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 DYDC1Q8WWB3 177 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 TCP11Q8WWU5 503 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 N4BP2L2Q92802 583 aaPredicted RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ZNF653Q96CK0 615 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 BTBD6Q96KE9 485 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 CBWD1Q9BRT8 395 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 DDX23Q9BUQ8 820 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ST6GALNAC4Q9H4F1 302 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 DONSONQ9NYP3 566 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 BAIAP2L1Q9UHR4 511 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ATRNL1Q5VV63 1379 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 TCP11X1B4DZS4 312 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 KIF1CO43896 1103 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ENTPD3O75355 529 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 SUN1O94901 812 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 UBOX5O94941 541 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 TTC4O95801 387 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 CLTAP09496 248 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 PLS3P13797 630 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 NQO1P15559 274 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 IVDP26440 423 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 ALDH1B1P30837 517 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 MXI1P50539 228 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 NCALDP61601 193 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 GTF2BQ00403 316 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 CDR2Q01850 454 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 CAV1Q03135 178 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 STRIP1Q5VSL9 837 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 ACAD10Q6JQN1 1059 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 MAIP1Q8WWC4 291 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 CKAP2Q8WWK9 683 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 SNF8Q96H20 258 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 GJD4Q96KN9 370 aaPredicted RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 POP1Q99575 1024 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
CDH13-204ENST00000539548 ZNF536O15090 1300 aa10.35□□□□□ -0.75
CDH13-204ENST00000539548 O00370 1275 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 CLDN3O15551 220 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 GJB6O95452 261 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 P4HBP07237 508 aaKnown RBP10.34□□□□□ -0.75
CDH13-204ENST00000539548 ALADP13716 330 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 CYP11B1P15538 503 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 MAN1A1P33908 653 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 KRT17Q04695 432 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 SF3A3Q12874 501 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDH13-204ENST00000539548 BNIP1Q12981 228 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 PTK6Q13882 451 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 SGO2Q562F6 1265 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 DACT2Q5SW24 774 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 C7orf43Q8WVR3 580 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 C1orf54Q8WWF1 131 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 MXRA8Q9BRK3 442 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 EBF2Q9HAK2 575 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 ARL2BPQ9Y2Y0 163 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 COQ4Q9Y3A0 265 aa10.34□□□□□ -0.75
CDH13-204ENST00000539548 A0A1B0GUA9 196 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ACSL3O95573 720 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 DLATP10515 647 aaKnown RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 CREB1P16220 341 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 COPS2P61201 443 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 LRRC14Q15048 493 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 HAUS6Q7Z4H7 955 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ZSWIM2Q8NEG5 633 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 GRK7Q8WTQ7 553 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 CHURC1Q8WUH1 139 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 SEMA4DQ92854 862 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms