RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ACTR5Q9H9F9 607 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 FGFR1OP2Q9NVK5 253 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 TTC7AQ9ULT0 858 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 SGPL1O95470 568 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 EGFRP00533 1210 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 CHRNB2P17787 502 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 RNASELQ05823 741 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 ERMARDQ5T6L9 678 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 DENND2CQ68D51 928 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 STXBP4Q6ZWJ1 553 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 KIFC3Q9BVG8 833 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 EPB41L4BQ9H329 900 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 HSPBP1Q9NZL4 362 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 TELO2Q9Y4R8 837 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 CCDC188H7C350 402 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 WNT10BO00744 389 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 SLC16A4O15374 487 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 ANP32DO95626 131 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 CCNE2O96020 404 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 FTLP02792 175 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 PLS3P13797 630 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 KCNA3P22001 575 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 EIF1ADQ8N9N8 165 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 AGAP11Q8TF27 550 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 MRRFQ96E11 262 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 PAIP2Q9BPZ3 127 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 TMEM117Q9H0C3 514 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 ALG6Q9Y672 507 aa13.49□□□□□ -0.25
SFSWAP-208ENST00000539506 CLSTN1O94985 981 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 CALCAP01258 141 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 ALAS1P13196 640 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 HAUS6Q7Z4H7 955 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM84AQ96KN4 292 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 ADAM7Q9H2U9 754 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 VCAM1P19320 739 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 SOX10P56693 466 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 GTF2BQ00403 316 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 MESDQ14696 234 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 CBWD2Q8IUF1 395 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 ZBED3Q96IU2 234 aaPredicted RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 SLITRK6Q9H5Y7 841 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 SAMD15Q9P1V8 674 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 GH1P01241 217 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 QARSP47897 775 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 PEX3P56589 373 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 MTMR1Q13613 665 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 WLSQ5T9L3 541 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 NSMFQ6X4W1 530 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 PAGR1Q9BTK6 254 aa13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 NOCTQ9UK39 431 aaKnown RBP13.48□□□□□ -0.25
SFSWAP-208ENST00000539506 TCP11X1B4DZS4 312 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 RPL21P46778 160 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 PTENP60484 403 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 RPS6P62753 249 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 SLC47A2Q86VL8 602 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 JAMLQ86YT9 394 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 TMEM174Q8WUU8 243 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 ASNSP08243 561 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 PGM5Q15124 567 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 AGBL2Q5U5Z8 902 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 ANKS4BQ8N8V4 417 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 XXYLT1Q8NBI6 393 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 C1orf131Q8NDD1 294 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 CARD9Q9H257 536 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
SFSWAP-208ENST00000539506 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms