RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR5M3Q8NGP4 307 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 MDM1Q8TC05 714 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 ADAMTS17Q8TE56 1095 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 LRTOMTQ8WZ04 291 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-208ENST00000536710 SAMD11Q96NU1 681 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 CDC5LQ99459 802 aaKnown RBP6.74□□□□□ -1.33
PRKDC-208ENST00000536710 ELAC2Q9BQ52 826 aaKnown RBP6.74□□□□□ -1.33
PRKDC-208ENST00000536710 PHTF1Q9UMS5 762 aa6.74□□□□□ -1.33
PRKDC-208ENST00000536710 FFAR3O14843 346 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 ARIH2O95376 493 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 AMY1AP04745 511 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 JUNP05412 331 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 VSIG10L2P0DP72 767 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 DDCP20711 480 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 CASRP41180 1078 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 GPSM2P81274 684 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 SAFB2Q14151 953 aaKnown RBP eCLIP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 FGL2Q14314 439 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 LONRF1Q17RB8 773 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 VMACQ2NL98 169 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 COL23A1Q86Y22 540 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 CERS3Q8IU89 383 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 ZGPATQ8N5A5 531 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 PLBD2Q8NHP8 589 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 SLC39A13Q96H72 371 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 MRGPRX4Q96LA9 322 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 STRBPQ96SI9 672 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 SLC6A15Q9H2J7 730 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 PNPOQ9NVS9 261 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 RTEL1Q9NZ71 1219 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 FEZ2Q9UHY8 353 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 RUVBL1Q9Y265 456 aaKnown RBP6.73□□□□□ -1.33
PRKDC-208ENST00000536710 NR2E1Q9Y466 385 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 DAAM1Q9Y4D1 1078 aa6.73□□□□□ -1.33
PRKDC-208ENST00000536710 A0A088AWK7 358 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 NRP1O14786 923 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 MALP21145 153 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 AK2P54819 239 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 LINC00310P59036 64 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 ZNF280AP59817 542 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-208ENST00000536710 PLS1Q14651 629 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 TBR1Q16650 682 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 PRAMEF14Q5SWL7 426 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 SWSAP1Q6NVH7 229 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 PDZD4Q76G19 769 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-208ENST00000536710 MORC1Q86VD1 984 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 IFI44Q8TCB0 444 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-208ENST00000536710 FAM167AQ96KS9 214 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 DMRTA2Q96SC8 542 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 TPCN1Q9ULQ1 816 aa6.72□□□□□ -1.33
PRKDC-208ENST00000536710 LOC102724159A0A0B4J2E5 919 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 A0A1W2PPL8 197 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 ARHGAP6O43182 974 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 MTSS1O43312 755 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 SASH1O94885 1247 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 RAP2AP10114 183 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 SLC5A1P13866 664 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 TYRP14679 529 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 IL2RBP14784 551 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 FPR1P21462 350 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 ADCY7P51828 1080 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 CAP1Q01518 475 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 TLE1Q04724 770 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 IFIT5Q13325 482 aaKnown RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 PWP2Q15269 919 aaKnown RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 C10orf62Q5T681 223 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 MCTP1Q6DN14 999 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 SRLQ86TD4 932 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 KBTBD2Q8IY47 623 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 TBCBQ99426 244 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 MYD88Q99836 296 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 NUP62CLQ9H1M0 184 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 EPC1Q9H2F5 836 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 ZMAT3Q9HA38 289 aaKnown RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 JADE2Q9NQC1 790 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 CNNM1Q9NRU3 951 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 KLHL11Q9NVR0 708 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 MOCS1Q9NZB8 636 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 PUF60Q9UHX1 559 aaKnown RBP6.71□□□□□ -1.34
PRKDC-208ENST00000536710 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 ACTL7AQ9Y615 435 aa6.71□□□□□ -1.34
PRKDC-208ENST00000536710 MROH6A6NGR9 719 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 NPIPB6E9PJ23 425 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 KRT1P04264 644 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 PCSK1P29120 753 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 GUCY1A2P33402 732 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 NPEPPSP55786 919 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 GJA9P57773 515 aa6.7□□□□□ -1.34
PRKDC-208ENST00000536710 NKX6-1P78426 367 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms