RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 MRE11P49959 708 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 VAMP7P51809 220 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 DLG4P78352 724 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SPAG1Q07617 926 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 APBB1IPQ7Z5R6 666 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 PLEKHO2Q8TD55 490 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 CCDC127Q96BQ5 260 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 POP1Q99575 1024 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 CXCL10P02778 98 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 CLTAP09496 248 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 KRT13P13646 458 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 GRM5P41594 1212 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 COPB1P53618 953 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 WNT7BP56706 349 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 UBASH3AP57075 661 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 CYP24A1Q07973 514 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 TCTN1Q2MV58 587 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 TCERG1LQ5VWI1 586 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SMG8Q8ND04 991 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 PARD3BQ8TEW8 1205 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SEPT8Q92599 483 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 CCDC51Q96ER9 411 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 APOL6Q9BWW8 343 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 TRIM5Q9C035 493 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 PDE11AQ9HCR9 933 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 IFNKQ9P0W0 207 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 IPPQ9Y573 584 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 PCDHB2Q9Y5E7 798 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDCA3-206ENST00000536241 SCN5AQ14524 2016 aa12.52□□□□□ -0.4
CDCA3-206ENST00000536241 PES1O00541 588 aaKnown RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 ENPP3O14638 875 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 CSF2RAP15509 400 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 AKAP5P24588 427 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 KCNH2Q12809 1159 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 BFSP1Q12934 665 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 ENOX2Q16206 610 aaKnown RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 MAN2A1Q16706 1144 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 KYAT1Q16773 422 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 DCAF17Q5H9S7 520 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 MIIPQ5JXC2 388 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 DPF3Q92784 378 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 VWCEQ96DN2 955 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
CDCA3-206ENST00000536241 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 PRKAG2Q9UGJ0 569 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 PARP2Q9UGN5 583 aa12.52□□□□□ -0.41
CDCA3-206ENST00000536241 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 TEX33O43247 280 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 EVI5O60447 810 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 ZNF623O75123 536 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 CXCL8P10145 99 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 DLATP10515 647 aaKnown RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 MCCD1P59942 119 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 NR1I3Q14994 352 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 PSMD6Q15008 389 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 C1orf220Q5T0J3 134 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 SLC24A5Q71RS6 500 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 MRPL10Q7Z7H8 261 aaKnown RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 BRSK2Q8IWQ3 736 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 TMEM199Q8N511 208 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 APBB2Q92870 758 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 LPPQ93052 612 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 SLC35C1Q96A29 364 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms