RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CARS2Q9HA77 564 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 VEZTQ9HBM0 779 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 RMND1Q9NWS8 449 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 TFCP2L1Q9NZI6 479 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 FAM184BQ9ULE4 1060 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 PA2G4Q9UQ80 394 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 PCDHA5Q9Y5H7 936 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ZNF609O15014 1411 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ZMYM6O95789 1325 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 UBN2Q6ZU65 1347 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 STK36Q9NRP7 1315 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 SYNRGQ9UMZ2 1314 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ABCC12Q96J65 1359 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 CASZ1Q86V15 1759 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 GOLGA6L10A6NI86 522 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 TMEM232C9JQI7 657 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 GOLIM4O00461 696 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 NDUFAB1O14561 156 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 ENPP3O14638 875 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PPP1R12AO14974 1030 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 MEFVO15553 781 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 PRC1O43663 620 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PRPF6O94906 941 aaKnown RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 ZNF205O95201 554 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PCCAP05165 728 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 XBP1P17861 261 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 CTSKP43235 329 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 CCT5P48643 541 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 IRX1P78414 480 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 MORC3Q14149 939 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 CRYMQ14894 314 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 SART3Q15020 963 aaKnown RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 EZH2Q15910 746 aaKnown RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 SLC15A2Q16348 729 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 ZNF827Q17R98 1081 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 GAB4Q2WGN9 574 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 LRCH2Q5VUJ6 765 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 ISM2Q6H9L7 571 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 EMBQ6PCB8 327 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 CYP2R1Q6VVX0 501 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 KIAA1328Q86T90 577 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 MAGEC3Q8TD91 643 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 TBC1D22AQ8WUA7 517 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 BCL7CQ8WUZ0 217 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP28-202ENST00000535607 SUCLG2Q96I99 432 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 GSDMAQ96QA5 445 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 NUP88Q99567 741 aaPredicted RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 DESI2Q9BSY9 194 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PAGR1Q9BTK6 254 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 NUP58Q9BVL2 599 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PLA2G12BQ9BX93 195 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 HSD3B7Q9H2F3 369 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 MRPL44Q9H9J2 332 aaKnown RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 PAG1Q9NWQ8 432 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 TMEM260Q9NX78 707 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 LMCD1Q9NZU5 365 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 MAN1B1Q9UKM7 699 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 PNPLA7Q6ZV29 1317 aa7.24□□□□□ -1.25
USP28-202ENST00000535607 DDX60Q8IY21 1712 aaKnown RBP7.24□□□□□ -1.25
USP28-202ENST00000535607 RTL9Q8NET4 1388 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 A0A1W2PQC6 194 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 ANKRD18BA2A2Z9 1011 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 LRRIQ3A6PVS8 624 aaPredicted RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 WASH4PA8MWX3 477 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 ZNF213O14771 459 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 AURKAO14965 403 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 ADCY3O60266 1144 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 USO1O60763 962 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 N4BP1O75113 896 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 ASMTLO95671 621 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 SYF2O95926 243 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 HSPD1P10809 573 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 FDPSP14324 419 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 MARCKSP29966 332 aaPredicted RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 IARSP41252 1262 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 PAFAH1B1P43034 410 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 METAP2P50579 478 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP28-202ENST00000535607 EPHB4P54760 987 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 GNGT1P63211 74 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 MAP4K2Q12851 820 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 BNIP3Q12983 259 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 ZKSCAN8Q15776 578 aaPredicted RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 HLFQ16534 295 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 RABL6Q3YEC7 729 aaPredicted RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 SHC4Q6S5L8 630 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 CCNI2Q6ZMN8 369 aaPredicted RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 TRAPPC11Q7Z392 1133 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 JAMLQ86YT9 394 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 TP53INP2Q8IXH6 220 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 CCDC170Q8IYT3 715 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 C1orf131Q8NDD1 294 aaKnown RBP7.23□□□□□ -1.25
USP28-202ENST00000535607 AGBL5Q8NDL9 886 aa7.23□□□□□ -1.25
USP28-202ENST00000535607 NOC3LQ8WTT2 800 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms