RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 STK4Q13043 487 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 THNSL1Q8IYQ7 743 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 LRRC43Q8N309 656 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 ZNF507Q8TCN5 953 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 SCFD1Q8WVM8 642 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 CXCL16Q9H2A7 254 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 TBC1D13Q9NVG8 400 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 FNDC1Q4ZHG4 1894 aaPredicted RBP27.14■■□□□ 1.94
USP48-214ENST00000532737 CHD7Q9P2D1 2997 aa27.14■■□□□ 1.93
USP48-214ENST00000532737 A0A0B4J269 797 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 EPOPA6NHQ4 379 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 EIF3DO15371 548 aaKnown RBP eCLIP27.13■■□□□ 1.93
USP48-214ENST00000532737 SEZ6Q53EL9 994 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 SYCP3Q8IZU3 236 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 KIAA0895Q8NCT3 520 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 GSTCDQ8NEC7 633 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 RSPH1Q8WYR4 309 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 ERCC4Q92889 916 aaPredicted RBP27.13■■□□□ 1.93
USP48-214ENST00000532737 MRPL9Q9BYD2 267 aaKnown RBP27.13■■□□□ 1.93
USP48-214ENST00000532737 TMEM206Q9H813 350 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 STYXL1Q9Y6J8 313 aa27.13■■□□□ 1.93
USP48-214ENST00000532737 RFXAPO00287 272 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 RHOBTB3O94955 611 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 POMCP01189 267 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 BMPR1AP36894 532 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 PSMD2Q13200 908 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 EPC2Q52LR7 807 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 SPOUT1Q5T280 376 aaKnown RBP27.12■■□□□ 1.93
USP48-214ENST00000532737 ELOA2Q8IYF1 753 aaPredicted RBP27.12■■□□□ 1.93
USP48-214ENST00000532737 URGCPQ8TCY9 931 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 SAMD11Q96NU1 681 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 CCDC94Q9BW85 323 aaPredicted RBP27.12■■□□□ 1.93
USP48-214ENST00000532737 PRDM12Q9H4Q4 367 aa27.12■■□□□ 1.93
USP48-214ENST00000532737 B4GALT3O60512 393 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 ADSSP30520 456 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 CTNNB1P35222 781 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 SCNN1GP51170 649 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 KCNB1Q14721 858 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 SLFN12LQ6IEE8 588 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 ZNF280BQ86YH2 543 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 CCDC47Q96A33 483 aaKnown RBP27.11■■□□□ 1.93
USP48-214ENST00000532737 MSTO1Q9BUK6 570 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 KANSL3Q9P2N6 904 aa27.11■■□□□ 1.93
USP48-214ENST00000532737 ZMYM2Q9UBW7 1377 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 MEFVO15553 781 aaPredicted RBP27.1■■□□□ 1.93
USP48-214ENST00000532737 FAM189A1O60320 539 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 ZBTB41Q5SVQ8 909 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 NELFCDQ8IXH7 590 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 ACAP3Q96P50 834 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 NRDE2Q9H7Z3 1164 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 HOOK1Q9UJC3 728 aaKnown RBP27.1■■□□□ 1.93
USP48-214ENST00000532737 PLAGL2Q9UPG8 496 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 RWDD3Q9Y3V2 267 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 PCDHA5Q9Y5H7 936 aa27.1■■□□□ 1.93
USP48-214ENST00000532737 OGTO15294 1046 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 DDHD2O94830 711 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 RNASELQ05823 741 aaKnown RBP27.09■■□□□ 1.93
USP48-214ENST00000532737 BMT2Q1RMZ1 405 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 COLGALT1Q8NBJ5 622 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 FBXO22Q8NEZ5 403 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 SPATA20Q8TB22 786 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 GBP3Q9H0R5 595 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 UBE4BO95155 1302 aa27.09■■□□□ 1.93
USP48-214ENST00000532737 C5orf67F2Z3F1 127 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 PTGESO14684 152 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 CLTAP09496 248 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 LAG3P18627 525 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 PBX3P40426 434 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 TNFSF9P41273 254 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 POMGNT1Q8WZA1 660 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 RPS6KC1Q96S38 1066 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 AAASQ9NRG9 546 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 DNAJB4Q9UDY4 337 aa27.08■■□□□ 1.93
USP48-214ENST00000532737 TGFB1I1O43294 461 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 SMC2O95347 1197 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 RB1P06400 928 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 YARSP54577 528 aaKnown RBP27.07■■□□□ 1.92
USP48-214ENST00000532737 SLC10A6Q3KNW5 377 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 XKR4Q5GH76 650 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 KCNT2Q6UVM3 1135 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 ALKAL1Q6UXT8 129 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 SMARCE1Q969G3 411 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 SNX27Q96L92 541 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 GSDMAQ96QA5 445 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 CBWD1Q9BRT8 395 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 PLVAPQ9BX97 442 aa27.07■■□□□ 1.92
USP48-214ENST00000532737 AGO2Q9UKV8 859 aaKnown RBP27.07■■□□□ 1.92
USP48-214ENST00000532737 GOLGA6L22H0YM25 854 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 ZC3H11AO75152 810 aaKnown RBP eCLIP27.06■■□□□ 1.92
USP48-214ENST00000532737 BCAR1P56945 870 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 GPM6BQ13491 265 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 KYAT1Q16773 422 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 KNOP1Q1ED39 458 aaKnown RBP27.06■■□□□ 1.92
USP48-214ENST00000532737 KLHL23Q8NBE8 558 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 GDPD5Q8WTR4 605 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 ZNF558Q96NG5 402 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 TOPORSQ9NS56 1045 aaPredicted RBP27.06■■□□□ 1.92
USP48-214ENST00000532737 CPSF3Q9UKF6 684 aaKnown RBP27.06■■□□□ 1.92
USP48-214ENST00000532737 PCDHB12Q9Y5F1 795 aa27.06■■□□□ 1.92
USP48-214ENST00000532737 H3BNC9 293 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms