RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 AGO2Q9UKV8 859 aaKnown RBP24.32■■□□□ 1.48
LRRK1-208ENST00000532029 MAPK8IP1Q9UQF2 711 aa24.32■■□□□ 1.48
LRRK1-208ENST00000532029 COL4A6Q14031 1691 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 LINC01553A4QN01 128 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 CLTAP09496 248 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 ADSSP30520 456 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 SEZ6Q53EL9 994 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 SPOUT1Q5T280 376 aaKnown RBP24.31■■□□□ 1.48
LRRK1-208ENST00000532029 ISM2Q6H9L7 571 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 GOLGA5Q8TBA6 731 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 GBF1Q92538 1859 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
LRRK1-208ENST00000532029 KANSL3Q9P2N6 904 aa24.31■■□□□ 1.48
LRRK1-208ENST00000532029 ARL5CA6NH57 179 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 BIN1O00499 593 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 TGFB1I1O43294 461 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 RNASELQ05823 741 aaKnown RBP24.3■■□□□ 1.48
LRRK1-208ENST00000532029 TMEM192Q8IY95 271 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 SMYD4Q8IYR2 804 aaPredicted RBP24.3■■□□□ 1.48
LRRK1-208ENST00000532029 LRCH3Q96II8 777 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 CBWD1Q9BRT8 395 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 AGPAT3Q9NRZ7 376 aa24.3■■□□□ 1.48
LRRK1-208ENST00000532029 TYW1Q9NV66 732 aaKnown RBP24.3■■□□□ 1.48
LRRK1-208ENST00000532029 MRPL42Q9Y6G3 142 aaKnown RBP24.3■■□□□ 1.48
LRRK1-208ENST00000532029 KIAA0391O15091 583 aaKnown RBP24.29■■□□□ 1.48
LRRK1-208ENST00000532029 INPPL1O15357 1258 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 LDHAP00338 332 aaKnown RBP24.29■■□□□ 1.48
LRRK1-208ENST00000532029 TAP1Q03518 808 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 STIM1Q13586 685 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 TRIML1Q8N9V2 468 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 NOC3LQ8WTT2 800 aaKnown RBP24.29■■□□□ 1.48
LRRK1-208ENST00000532029 ZFP42Q96MM3 310 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 PCIF1Q9H4Z3 704 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 RPF1Q9H9Y2 349 aaKnown RBP24.29■■□□□ 1.48
LRRK1-208ENST00000532029 TBC1D13Q9NVG8 400 aa24.29■■□□□ 1.48
LRRK1-208ENST00000532029 TMEM265A0A087WTH1 108 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 CLIC2O15247 247 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 CALUO43852 315 aaPredicted RBP24.28■■□□□ 1.48
LRRK1-208ENST00000532029 POMCP01189 267 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 SCNN1GP51170 649 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 MORC3Q14149 939 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 COBLL1Q53SF7 1204 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 FAM193BQ96PV7 902 aaPredicted RBP24.28■■□□□ 1.48
LRRK1-208ENST00000532029 TGS1Q96RS0 853 aaKnown RBP24.28■■□□□ 1.48
LRRK1-208ENST00000532029 KCTD10Q9H3F6 313 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 RWDD3Q9Y3V2 267 aa24.28■■□□□ 1.48
LRRK1-208ENST00000532029 PDXKO00764 312 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 FAM189A1O60320 539 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 ARHGEF15O94989 841 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 PPP1R2P41236 205 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 TNFSF9P41273 254 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 ACOT2P49753 483 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 AFF1P51825 1210 aaKnown RBP24.27■■□□□ 1.48
LRRK1-208ENST00000532029 ZBTB41Q5SVQ8 909 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 LRRC55Q6ZSA7 311 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 SAAL1Q96ER3 474 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 SNX27Q96L92 541 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 SAMD11Q96NU1 681 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 FAM213AQ9BRX8 229 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 AAASQ9NRG9 546 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 MIOSQ9NXC5 875 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 HSPBP1Q9NZL4 362 aa24.27■■□□□ 1.48
LRRK1-208ENST00000532029 CPSF3Q9UKF6 684 aaKnown RBP24.27■■□□□ 1.48
LRRK1-208ENST00000532029 FNDC1Q4ZHG4 1894 aaPredicted RBP24.27■■□□□ 1.48
LRRK1-208ENST00000532029 EXTL3O43909 919 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 CXCL8P10145 99 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 LAG3P18627 525 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 PRCPP42785 496 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 CYP2J2P51589 502 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 PPP2R3AQ06190 1150 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 GRIK3Q13003 919 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 HSP90AA2PQ14568 343 aaPredicted RBP24.26■■□□□ 1.47
LRRK1-208ENST00000532029 CCDC183Q5T5S1 534 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 ZNF697Q5TEC3 545 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 GPD1LQ8N335 351 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 CWH43Q9H720 699 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 PLEKHA5Q9HAU0 1116 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
LRRK1-208ENST00000532029 GOLGA8IPA6NC78 632 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 GOLGA8JA6NMD2 632 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 THP07101 528 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 CTNNB1P35222 781 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 ERVK-21P61565 698 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 ENOX2Q16206 610 aaKnown RBP24.25■■□□□ 1.47
LRRK1-208ENST00000532029 SLC10A6Q3KNW5 377 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 C12orf56Q8IXR9 622 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 ADSSL1Q8N142 457 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 XXYLT1Q8NBI6 393 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 GSTCDQ8NEC7 633 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 CLP1Q92989 425 aaKnown RBP24.25■■□□□ 1.47
LRRK1-208ENST00000532029 SYAP1Q96A49 352 aaPredicted RBP24.25■■□□□ 1.47
LRRK1-208ENST00000532029 FAM212AQ96EL1 285 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 C17orf80Q9BSJ5 609 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 ZNF576Q9H609 170 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 HCSTQ9UBK5 93 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 MTUS1Q9ULD2 1270 aa24.25■■□□□ 1.47
LRRK1-208ENST00000532029 PSMA7O14818 248 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 ZC3H11AO75152 810 aaKnown RBP eCLIP24.24■■□□□ 1.47
LRRK1-208ENST00000532029 POU5F1Q01860 360 aaKnown RBP24.24■■□□□ 1.47
LRRK1-208ENST00000532029 XKR4Q5GH76 650 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms