RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 TNFSF9P41273 254 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 PRCPP42785 496 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 OSTNP61366 133 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 LRRC55Q6ZSA7 311 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 ZSWIM2Q8NEG5 633 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 NKX2-4Q9H2Z4 354 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 KLK14Q9P0G3 267 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 PARP2Q9UGN5 583 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 KIAA1671Q9BY89 1806 aa23.28■■□□□ 1.32
CAPN1-220ENST00000530567 LINC01553A4QN01 128 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 ARL5CA6NH57 179 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 CITO14578 2027 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 BTG3Q14201 252 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-220ENST00000530567 NOMO2Q5JPE7 1267 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 RBM43Q6ZSC3 357 aaKnown RBP23.27■■□□□ 1.32
CAPN1-220ENST00000530567 SPRED2Q7Z698 418 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 ABI1Q8IZP0 508 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 LRCH3Q96II8 777 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 CCDC94Q9BW85 323 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-220ENST00000530567 MIOSQ9NXC5 875 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 MSRAQ9UJ68 235 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 AGO2Q9UKV8 859 aaKnown RBP23.27■■□□□ 1.32
CAPN1-220ENST00000530567 INPP5FQ9Y2H2 1132 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 MRPL42Q9Y6G3 142 aaKnown RBP23.27■■□□□ 1.32
CAPN1-220ENST00000530567 TRIP11Q15643 1979 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 RALGAPA2Q2PPJ7 1873 aa23.27■■□□□ 1.32
CAPN1-220ENST00000530567 CD44P16070 742 aaKnown RBP23.26■■□□□ 1.31
CAPN1-220ENST00000530567 ZCWPW2Q504Y3 356 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 ARMCX5Q6P1M9 558 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 CRELD2Q6UXH1 353 aaPredicted RBP23.26■■□□□ 1.31
CAPN1-220ENST00000530567 C12orf56Q8IXR9 622 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 TRIML1Q8N9V2 468 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 RSPH1Q8WYR4 309 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 SNX27Q96L92 541 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 TYW1Q9NV66 732 aaKnown RBP23.26■■□□□ 1.31
CAPN1-220ENST00000530567 TBC1D13Q9NVG8 400 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 TMEM63CQ9P1W3 806 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 CPSF3Q9UKF6 684 aaKnown RBP23.26■■□□□ 1.31
CAPN1-220ENST00000530567 PLAGL2Q9UPG8 496 aa23.26■■□□□ 1.31
CAPN1-220ENST00000530567 PTGESO14684 152 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 B4GALT3O60512 393 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CLTAP09496 248 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ACOT2P49753 483 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 SNRPFP62306 86 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 TAP1Q03518 808 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 SLC10A6Q3KNW5 377 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 XKR4Q5GH76 650 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ALKAL1Q6UXT8 129 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 HS2ST1Q7LGA3 356 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ADSSL1Q8N142 457 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 LRRC43Q8N309 656 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 SAAL1Q96ER3 474 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ACAP3Q96P50 834 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 GTPBP4Q9BZE4 634 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 SEMA6BQ9H3T3 888 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 PCIF1Q9H4Z3 704 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CHD7Q9P2D1 2997 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 PDXKO00764 312 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CLIC2O15247 247 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 KIF20AO95235 890 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CXCL8P10145 99 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 SCNN1GP51170 649 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ENOX2Q16206 610 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 KYAT1Q16773 422 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CCDC183Q5T5S1 534 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 FIBCD1Q8N539 461 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CLP1Q92989 425 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 MRPL9Q9BYD2 267 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CWH43Q9H720 699 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 HSPBP1Q9NZL4 362 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 CGNQ9P2M7 1197 aaKnown RBP23.25■■□□□ 1.31
CAPN1-220ENST00000530567 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
CAPN1-220ENST00000530567 ANK1P16157 1881 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 TDRD15B5MCY1 1934 aaKnown RBP23.24■■□□□ 1.31
CAPN1-220ENST00000530567 PPP1R3GB7ZBB8 358 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 POMCP01189 267 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 ADRB2P07550 413 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 KLHL40Q2TBA0 621 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 GOLGA5Q8TBA6 731 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 URGCPQ8TCY9 931 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 TMEM174Q8WUU8 243 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 FBXL18Q96ME1 805 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 TOPORSQ9NS56 1045 aaPredicted RBP23.24■■□□□ 1.31
CAPN1-220ENST00000530567 PDCD11Q14690 1871 aaKnown RBP23.24■■□□□ 1.31
CAPN1-220ENST00000530567 NLRC5Q86WI3 1866 aa23.24■■□□□ 1.31
CAPN1-220ENST00000530567 TTC26A0AVF1 554 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 GOLGA8IPA6NC78 632 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 GOLGA8JA6NMD2 632 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 EXTL3O43909 919 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 PTMSP20962 102 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 YARSP54577 528 aaKnown RBP23.23■■□□□ 1.31
CAPN1-220ENST00000530567 PPP2R2DQ66LE6 453 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 ZNF280BQ86YH2 543 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 ZMAT2Q96NC0 199 aaKnown RBP23.23■■□□□ 1.31
CAPN1-220ENST00000530567 FAM213AQ9BRX8 229 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 DMAC2Q9NW81 257 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 CNTN3Q9P232 1028 aa23.23■■□□□ 1.31
CAPN1-220ENST00000530567 KIAA0391O15091 583 aaKnown RBP23.22■■□□□ 1.31
CAPN1-220ENST00000530567 DDHD2O94830 711 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms