RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 DNAJC3Q13217 504 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 TFDP2Q14188 446 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 KYNUQ16719 465 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 KNOP1Q1ED39 458 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 DAB2IPQ5VWQ8 1189 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 GADL1Q6ZQY3 521 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 STRBPQ96SI9 672 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SLC9A2Q9UBY0 812 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 HAO1Q9UJM8 370 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 UBE4BO95155 1302 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 FAM47DPA6NHR8 397 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 K7ERI5 159 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SMARCA1P28370 1054 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SCTRP47872 440 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PAPOLAP51003 745 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 ROR1Q01973 937 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PLOD1Q02809 727 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 COBLL1Q53SF7 1204 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 AGBL2Q5U5Z8 902 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PRPF39Q86UA1 669 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 CLEC4FQ8N1N0 589 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM35BQ8NCS4 154 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SLC30A5Q8TAD4 765 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SLC35G2Q8TBE7 412 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.06□□□□□ -1.125e-6■■■□□ 16.7
CTNND1-223ENST00000529986 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 FSD1LQ9BXM9 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 RUBCNLQ9H714 662 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 DLC1Q96QB1 1528 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NBPF26B4DH59 902 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SNAP23O00161 211 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 ATP9BO43861 1147 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PAMP19021 973 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 RXRBP28702 533 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 DNAL1Q4LDG9 190 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 ZCWPW2Q504Y3 356 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 MIS18BP1Q6P0N0 1132 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L6PQ6QN14 398 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 TTC8Q8TAM2 541 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PBXIP1Q96AQ6 731 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PAWRQ96IZ0 340 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NLRP4Q96MN2 994 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NPHP3-ACAD11A0A0J9YXS1 232 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 BMP3P12645 472 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 KCNJ1P48048 391 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NR1I3Q14994 352 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SYDE2Q5VT97 1194 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 LVRNQ6Q4G3 990 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 LAYNQ6UX15 382 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 KDELC2Q7Z4H8 507 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 RHOT1Q8IXI2 618 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 XXYLT1Q8NBI6 393 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 MYCBPAPQ8TBZ2 947 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SCG3Q8WXD2 468 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 MTRQ99707 1265 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PCMTD2Q9NV79 361 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 IQGAP1P46940 1657 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 CLTCQ00610 1675 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 LINC00854A0A1B0GVQ3 168 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 NQO1P15559 274 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SESN2P58004 480 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 STX3Q13277 289 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 SLC29A2Q14542 456 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PFKFB3Q16875 520 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PDCD6IPQ8WUM4 868 aaKnown RBP8.06□□□□□ -1.12
CTNND1-223ENST00000529986 CCDC134Q9H6E4 229 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 ASNSD1Q9NWL6 643 aa8.06□□□□□ -1.12
CTNND1-223ENST00000529986 PNMA6FA0A0J9YX94 578 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 PIK3R2O00459 728 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 NFIBO00712 420 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 CYP26A1O43174 497 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 CDH16O75309 829 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 ESRRBO95718 433 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 SERPINB1P30740 379 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 VAMP7P51809 220 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 TRIM16LQ309B1 348 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 DEPDC1Q5TB30 811 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 HEATR6Q6AI08 1181 aaKnown RBP8.05□□□□□ -1.12
CTNND1-223ENST00000529986 FLCNQ8NFG4 579 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 RNPEPQ9H4A4 650 aa8.05□□□□□ -1.12
CTNND1-223ENST00000529986 RPF1Q9H9Y2 349 aaKnown RBP8.05□□□□□ -1.12
CTNND1-223ENST00000529986 IL1RL2Q9HB29 575 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms