RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PP2D1A8MPX8 630 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 GFRA3O60609 400 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 URODP06132 367 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 ADH1AP07327 375 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 PLS3P13797 630 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 SYT1P21579 422 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 MTHFRP42898 656 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 SCNN1GP51170 649 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 AFF1P51825 1210 aaKnown RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 ELAVL2Q12926 359 aaKnown RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 TUSC3Q13454 348 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 SF3A1Q15459 793 aaKnown RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 KYAT1Q16773 422 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 PDXDC1Q6P996 788 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 CYP26C1Q6V0L0 522 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 HDAC7Q8WUI4 952 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 SUSD6Q92537 303 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 SNX21Q969T3 373 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 ZFP42Q96MM3 310 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 CCDC94Q9BW85 323 aaPredicted RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 S1PR5Q9H228 398 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 MIOSQ9NXC5 875 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 SNTG2Q9NY99 539 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 CCDC39Q9UFE4 941 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 ODF2LQ9ULJ1 636 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
CHD7-208ENST00000528280 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
CHD7-208ENST00000528280 DCHS1Q96JQ0 3298 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 LOC730098B7Z3J9 87 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 LILRB3O75022 631 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 DDIT3P35638 169 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 TXLNAP40222 546 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 GLUD2P49448 558 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 PTPN14Q15678 1187 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 TMEM119Q4V9L6 283 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 SYCE2Q6PIF2 218 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 DCLRE1AQ6PJP8 1040 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 ERMP1Q7Z2K6 904 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 TMEM173Q86WV6 379 aaPredicted RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 CDR2LQ86X02 465 aaPredicted RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 GSTCDQ8NEC7 633 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 VN1R2Q8NFZ6 395 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 SLC22A17Q8WUG5 538 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 KCNN1Q92952 543 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 DDX27Q96GQ7 796 aaKnown RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 UROC1Q96N76 676 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 KLHL5Q96PQ7 755 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 PNMA5Q96PV4 448 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 PRRX2Q99811 253 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 RUSC1Q9BVN2 902 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 HERC2P3Q9BVR0 1158 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 CCSER1Q9C0I3 900 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 CHST7Q9NS84 486 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 KLK14Q9P0G3 267 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 ARHGAP28Q9P2N2 729 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
CHD7-208ENST00000528280 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 MORC2Q9Y6X9 1032 aaPredicted RBP10.54□□□□□ -0.72
CHD7-208ENST00000528280 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 SFI1A8K8P3 1242 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 TOM1L1O75674 476 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 BRD1O95696 1058 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 EFEMP2O95967 443 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 KRT18P05783 430 aaKnown RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 HSP90AA1P07900 732 aaKnown RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 CNPP09543 421 aaKnown RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 MCF2P10911 925 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 GRM5P41594 1212 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 DSG1Q02413 1049 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 TCF15Q12870 199 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 HSP90AA2PQ14568 343 aaPredicted RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 HERC4Q5GLZ8 1057 aaPredicted RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 IER5LQ5T953 404 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 KIAA0319Q5VV43 1072 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 ZPBP2Q6X784 338 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 KCNK18Q7Z418 384 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 BMP8AQ7Z5Y6 402 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 RNF168Q8IYW5 571 aaPredicted RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 DAW1Q8N136 415 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 BCL7CQ8WUZ0 217 aaPredicted RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 ACAP3Q96P50 834 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 TSPAN18Q96SJ8 248 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 PLIN2Q99541 437 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 PLEKHA4Q9H4M7 779 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 SFXN1Q9H9B4 322 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 POLD4Q9HCU8 107 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms