RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CNNM1Q9NRU3 951 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 CALCOCO1Q9P1Z2 691 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 AJAP1Q9UKB5 411 aaPredicted RBP4.95□□□□□ -1.62
SKP1-212ENST00000523966 OAZ3Q9UMX2 235 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 STXBP5LQ9Y2K9 1186 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 PCDHB1Q9Y5F3 818 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 NPEPPSL1A6NEC2 478 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 H3BUI4 141 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 CNOT4O95628 575 aaKnown RBP4.94□□□□□ -1.62
SKP1-212ENST00000523966 MYBP10242 640 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 SP140Q13342 867 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 GRM3Q14832 879 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 KHDC1Q4VXA5 237 aaKnown RBP4.94□□□□□ -1.62
SKP1-212ENST00000523966 UBXN11Q5T124 520 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 SLFN13Q68D06 897 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 FAM111BQ6SJ93 734 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 TAX1BP1Q86VP1 789 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 SYT8Q8NBV8 401 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 REPS2Q8NFH8 660 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 NSUN6Q8TEA1 469 aaKnown RBP4.94□□□□□ -1.62
SKP1-212ENST00000523966 CASKIN2Q8WXE0 1202 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 HOXB13Q92826 284 aaPredicted RBP4.94□□□□□ -1.62
SKP1-212ENST00000523966 RAB24Q969Q5 203 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 GPHA2Q96T91 129 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 DPYSL5Q9BPU6 564 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 LMBRD1Q9NUN5 540 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 GNL3LQ9NVN8 582 aaKnown RBP4.94□□□□□ -1.62
SKP1-212ENST00000523966 PCDHA3Q9Y5H8 950 aa4.94□□□□□ -1.62
SKP1-212ENST00000523966 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 ADCY6O43306 1168 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 B3GALT2O43825 422 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 TRIM13O60858 407 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 TUSC2O75896 110 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 ALDH2P05091 517 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 GNAT2P19087 354 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 CNR2P34972 360 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 SLC6A9P48067 706 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 FLT3LGP49771 235 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 MAP2K6P52564 334 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 CACNB3P54284 484 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 DSC2Q02487 901 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 HHEXQ03014 270 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 NOGQ13253 232 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 MRPL49Q13405 166 aaKnown RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 LLGL1Q15334 1064 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 COBLL1Q53SF7 1204 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 FAM47AQ5JRC9 791 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 PRAMEF14Q5SWL7 426 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 MFSD5Q6N075 450 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 DARS2Q6PI48 645 aaKnown RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 SIAH1Q8IUQ4 282 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 TRMT2AQ8IZ69 625 aaKnown RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 SH2D3CQ8N5H7 860 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 AOPEPQ8N6M6 819 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 FBXO18Q8NFZ0 1043 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 PPP1R35Q8TAP8 253 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 KLHDC4Q8TBB5 520 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 TIFAQ96CG3 184 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 VRK1Q99986 396 aaPredicted RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 SARS2Q9NP81 518 aaKnown RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 FEZ2Q9UHY8 353 aaPredicted RBP4.93□□□□□ -1.62
SKP1-212ENST00000523966 SIK3Q9Y2K2 1263 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 NR2E3Q9Y5X4 410 aa4.93□□□□□ -1.62
SKP1-212ENST00000523966 CAPN8A6NHC0 703 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 PRR5-ARHGAP8B1AHC4 643 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 HOXA3O43365 443 aaPredicted RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 MFAP3LO75121 409 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 MTHFD1P11586 935 aaKnown RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 ATP5JP18859 108 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 FXR1P51114 621 aaKnown RBP eCLIP4.92□□□□□ -1.62
SKP1-212ENST00000523966 HK3P52790 923 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 EPHB4P54760 987 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 CTXN1P60606 82 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 GPSM2P81274 684 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 PURAQ00577 322 aaKnown RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 OS9Q13438 667 aaPredicted RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 PICALMQ13492 652 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 FGL2Q14314 439 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 GRM7Q14831 915 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 KIAA0753Q2KHM9 967 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ANO6Q4KMQ2 910 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 FKBP15Q5T1M5 1219 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 GLB1LQ6UWU2 654 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ZNF572Q7Z3I7 529 aaPredicted RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 HEATR3Q7Z4Q2 680 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 FAM83AQ86UY5 434 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 FEZF2Q8TBJ5 459 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 CFHR4Q92496 578 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 TMEM176AQ96HP8 235 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 OR14A2Q96R54 314 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 SARGQ9BW04 601 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 TMEM60Q9H2L4 133 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 WDCPQ9H6R7 721 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ARMT1Q9H993 441 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ARNT2Q9HBZ2 717 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 PNPOQ9NVS9 261 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 ABCF2Q9UG63 623 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms