RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 HYIQ5T013 277 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZNF483Q8TF39 744 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 GRK7Q8WTQ7 553 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 PHTF1Q9UMS5 762 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZNF142P52746 1687 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 BCORQ6W2J9 1755 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 FAM47DPA6NHR8 397 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 KIF3CO14782 793 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 MSH4O15457 936 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ENTPD5O75356 428 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 GNAT1P11488 350 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 IZUMO3Q5VZ72 239 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ART4Q93070 314 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 KCNMB3Q9NPA1 279 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZNF148Q9UQR1 794 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ITIH2P19823 946 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 CYP4X1Q8N118 509 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 DNAJC9Q8WXX5 260 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 NPHS2Q9NP85 383 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 METTL5Q9NRN9 209 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZFP69BQ9UJL9 534 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 DAGLAQ9Y4D2 1042 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 TAF1P21675 1872 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 SMNDC1O75940 238 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 VAMP7P51809 220 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 DLG4P78352 724 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GPSM2P81274 684 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 KLC1Q07866 573 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GRAPQ13588 217 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 MPP2Q14168 576 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 TEKT4Q8WW24 435 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 MAGEB18Q96M61 343 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLIT2O94813 1529 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 DCTN3O75935 186 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GDF11O95390 407 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 CTNNA2P26232 953 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZDHHC14Q8IZN3 488 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.222e-7■■■■■ 55.9
TRAPPC9-208ENST00000520857 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 RBM15Q96T37 977 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■■ 33.2
TRAPPC9-208ENST00000520857 TRIM4Q9C037 500 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 NINJ2Q9NZG7 142 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 DOCK2Q92608 1830 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GOLGA8SH3BPF8 625 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 CALCAP01258 141 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 TROVE2P10155 538 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 CALB2P22676 271 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 SSTR3P32745 418 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 BLMHQ13867 455 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 RCN2Q14257 317 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 C11orf63Q6NUN7 778 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 TTC8Q8TAM2 541 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 GRAMD1AQ96CP6 724 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 KLHL11Q9NVR0 708 aa13.67□□□□□ -0.22
TRAPPC9-208ENST00000520857 PLS3P13797 630 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 ATP4AP20648 1035 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 CDR2Q01850 454 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 OVGP1Q12889 678 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 AP3B2Q13367 1082 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 MTFR1Q15390 333 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 GOLGA8RI6L899 631 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 RHBDL3P58872 404 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 ICA1Q05084 483 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 LARSQ9P2J5 1176 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 ATP5HO75947 161 aa13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-208ENST00000520857 STK32AQ8WU08 396 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms