RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 IL1RAPL1Q9NZN1 696 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 TBK1Q9UHD2 729 aa12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 MAGED2Q9UNF1 606 aaPredicted RBP12.82□□□□□ -0.36
ERGIC1-208ENST00000520399 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 DEAF1O75398 565 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 PAMP19021 973 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 ST13P50502 369 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 MRPS26Q9BYN8 205 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 CCDC78A2IDD5 438 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 GPC5P78333 572 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 KIAA1841Q6NSI8 718 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 PPHLN1Q8NEY8 458 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 OR6B3Q8NGW1 331 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 BHMTQ93088 406 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 OMA1Q96E52 524 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 FAM84BQ96KN1 310 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 INTS2Q9H0H0 1204 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 SLC16A4O15374 487 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 ITGB3BPQ13352 177 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 LLGL1Q15334 1064 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 RNF219Q5W0B1 726 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 BTN2A2Q8WVV5 523 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 RBM41Q96IZ5 413 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 KLC2Q9H0B6 622 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 EPN3Q9H201 632 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 H0Y3Z8 333 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 P4HBP07237 508 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 GGCXP38435 758 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 PHKA2P46019 1235 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 KCNA1Q09470 495 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 FASTKD5Q7L8L6 764 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 DNAJC9Q8WXX5 260 aa12.81□□□□□ -0.36
ERGIC1-208ENST00000520399 LSM1O15116 133 aaKnown RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF18P17022 549 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CAPZA2P47755 286 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ATP2C1P98194 919 aaPredicted RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 STX3Q13277 289 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ZFP42Q96MM3 310 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 MAGEA13PA6NCF6 341 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CLDN3O15551 220 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 S100A1P23297 94 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CDO1Q16878 200 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 PCGF5Q86SE9 256 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 PLAAQ9Y263 795 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 P4HA2O15460 535 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ZSCAN9O15535 394 aaPredicted RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CALB1P05937 261 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 STAT3P40763 770 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 VAMP7P51809 220 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 IMPG1Q17R60 797 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 NOD2Q9HC29 1040 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 THNSL1Q8IYQ7 743 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 PYROXD1Q8WU10 500 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 SCG3Q8WXD2 468 aaKnown RBP12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ADAM22Q9P0K1 906 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 ARHGAP26Q9UNA1 814 aa12.8□□□□□ -0.36
ERGIC1-208ENST00000520399 EIF4E1BA6NMX2 242 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 GCLMP48507 274 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 USP11P51784 963 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 EXOSC10Q01780 885 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 GINM1Q9NU53 330 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 KPNB1Q14974 876 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 BBS9Q3SYG4 887 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 KRT39Q6A163 491 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 SHC4Q6S5L8 630 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms