RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CLDN3O15551 220 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 NCK2O43639 380 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 KLRC4O43908 158 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 NMT1P30419 496 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 SNRPFP62306 86 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 KCNC3Q14003 757 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 DHX8Q14562 1220 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 DDX53Q86TM3 631 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 ZNF280BQ86YH2 543 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 RNF169Q8NCN4 708 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 SNX27Q96L92 541 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-212ENST00000519661 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 MIOSQ9NXC5 875 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 CHMP5Q9NZZ3 219 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 KIAA0391O15091 583 aaKnown RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 OGTO15294 1046 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 PAPLNO95428 1278 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 CLTAP09496 248 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 AKAP5P24588 427 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 ADSSP30520 456 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SYKP43405 635 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SLC11A1P49279 550 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SCNN1GP51170 649 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 NDUFA8P51970 172 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 COASYQ13057 564 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 TUSC3Q13454 348 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SNW1Q13573 536 aaKnown RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 HERC4Q5GLZ8 1057 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 TMEM173Q86WV6 379 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 ZNF507Q8TCN5 953 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 TIGD1Q96MW7 591 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 VN1R3Q9BXE9 311 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 NSUN3Q9H649 340 aaKnown RBP12.61□□□□□ -0.39
SPIDR-212ENST00000519661 MARCH5Q9NX47 278 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 SNTG2Q9NY99 539 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 DNAJB4Q9UDY4 337 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 COG5Q9UP83 839 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 MYH11P35749 1972 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 BRWD1Q9NSI6 2320 aa12.61□□□□□ -0.39
SPIDR-212ENST00000519661 A0A0C4DFX4 3053 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 LILRB3O75022 631 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ALDH2P05091 517 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 GARTP22102 1010 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 HOXD13P35453 343 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CASP5P51878 434 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 KRT17Q04695 432 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 PSMD2Q13200 908 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 POSTNQ15063 836 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 SLC10A6Q3KNW5 377 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ZC2HC1CQ53FD0 456 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 TMEM184AQ6ZMB5 413 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 KRBA2Q6ZNG9 492 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CD302Q8IX05 232 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 C12orf56Q8IXR9 622 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CEP57L1Q8IYX8 460 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CEP120Q8N960 986 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 BCL7CQ8WUZ0 217 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 POF1BQ8WVV4 589 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ZBTB45Q96K62 511 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 FBXL18Q96ME1 805 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 UROC1Q96N76 676 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ZBP1Q9H171 429 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CGNQ9P2M7 1197 aaKnown RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 PUF60Q9UHX1 559 aaKnown RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 CPSF3Q9UKF6 684 aaKnown RBP12.6□□□□□ -0.39
SPIDR-212ENST00000519661 EXOC7Q9UPT5 735 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 TCHHQ07283 1943 aa12.6□□□□□ -0.39
SPIDR-212ENST00000519661 ATG2AQ2TAZ0 1938 aa12.59□□□□□ -0.39
SPIDR-212ENST00000519661 TTC28Q96AY4 2481 aa12.59□□□□□ -0.39
SPIDR-212ENST00000519661 SMIM28A0A1B0GU29 152 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms