RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 MYBL1P10243 752 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 BCRP11274 1271 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 IL1R1P14778 569 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 IVDP26440 423 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 GCLMP48507 274 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 CCNG1P51959 295 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 INHBEP58166 350 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 PPP3CAQ08209 521 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
PCM1-203ENST00000517545 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 PLCD4Q9BRC7 762 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 WHRNQ9P202 907 aa13.23□□□□□ -0.29
PCM1-203ENST00000517545 EP400Q96L91 3159 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 A6NHS1 94 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 HIP1RO75146 1068 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 GNAZP19086 355 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 ATP5DP30049 168 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 C12orf50Q8NA57 414 aaPredicted RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 FAM20AQ96MK3 541 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 FAM118BQ9BPY3 351 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 PEX11AO75192 247 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 SLITRK3O94933 977 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 RWDD2BP57060 319 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 NFIL3Q16649 462 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 VSIG1Q86XK7 387 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 FBF1Q8TES7 1133 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 PSPC1Q8WXF1 523 aaKnown RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 HSD17B14Q9BPX1 270 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 SLCO1B3Q9NPD5 702 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 NKIRAS1Q9NYS0 192 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 SPAG7O75391 227 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 SREBF1P36956 1147 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 THEMIS2Q5TEJ8 643 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
PCM1-203ENST00000517545 CHKBQ9Y259 395 aa13.22□□□□□ -0.29
PCM1-203ENST00000517545 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 H0Y3Z8 333 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 KIF3CO14782 793 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 CYP26A1O43174 497 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 SKIV2L2P42285 1042 aaKnown RBP13.21□□□□□ -0.29
PCM1-203ENST00000517545 TUBP50607 506 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 RAD23BP54727 409 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 GTF2IP78347 998 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 ANO7Q6IWH7 933 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
PCM1-203ENST00000517545 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 ZNF653Q96CK0 615 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 SNF8Q96H20 258 aa13.21□□□□□ -0.29
PCM1-203ENST00000517545 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.29
PCM1-203ENST00000517545 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
PCM1-203ENST00000517545 MAP3K13O43283 966 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 PDHA1P08559 390 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 ZNF76P36508 570 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.3
PCM1-203ENST00000517545 TCEAL1Q15170 157 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 ZNF449Q6P9G9 518 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 SLF2Q8IX21 1173 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 FAM13CQ8NE31 585 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 RAB3IPQ96QF0 476 aaPredicted RBP13.21□□□□□ -0.3
PCM1-203ENST00000517545 KIAA1683Q9H0B3 1180 aa13.21□□□□□ -0.3
PCM1-203ENST00000517545 LIN7AO14910 233 aaPredicted RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 WFS1O76024 890 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 ITIH2P19823 946 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 STRN3Q13033 797 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 TMED2Q15363 201 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 TXLNGQ9NUQ3 528 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 USP21Q9UK80 565 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 R3HDM2Q9Y2K5 976 aaKnown RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 CNTNAP4Q9C0A0 1308 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 FSCN2O14926 492 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 MTA2O94776 668 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 LUC7L3O95232 432 aaKnown RBP13.2□□□□□ -0.3
PCM1-203ENST00000517545 CALCAP01258 141 aa13.2□□□□□ -0.3
PCM1-203ENST00000517545 TPBGLP0DKB5 382 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms