RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 CELA1Q9UNI1 258 aa-0.31□□□□□ -2.46
RNU6-1238P-201ENST00000517215 COA3Q9Y2R0 106 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SF3B6Q9Y3B4 125 aaKnown RBP-0.31□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MAFBQ9Y5Q3 323 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PRSS21Q9Y6M0 314 aa-0.31□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZMYM2Q9UBW7 1377 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 WDR17Q8IZU2 1322 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ACIN1Q9UKV3 1341 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MEIOCA2RUB1 952 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DENND3A2RUS2 1198 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PRAMEF22A3QJZ6 481 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GOLGA8BA8MQT2 603 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BTBD18B2RXH4 712 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 J3KR12 359 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FZD9O00144 591 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 STXBP3O00186 592 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BMPR1BO00238 502 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SPTLC2O15270 562 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MPPED1O15442 326 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FBXO24O75426 580 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DNAJB5O75953 348 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 STC2O76061 302 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HTR3BO95264 441 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 P0C879 139 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NHLRC4P0CG21 123 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 VSIG10L2P0DP72 767 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZBTB48P10074 688 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 COL6A2P12110 1019 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 EN2P19622 333 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GSTT1P30711 240 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RBM25P49756 843 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GTF2A2P52657 109 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ART1P52961 327 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DSCR9P59020 149 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF445P59923 1031 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RPL11P62913 178 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PHC1P78364 1004 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ORC1Q13415 861 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TCIRG1Q13488 830 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ACAP1Q15027 740 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DGKDQ16760 1214 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SPDYE7PQ495Y7 208 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 C20orf194Q5TEA3 1177 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KAZNQ674X7 775 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TTBK2Q6IQ55 1244 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MIS18BP1Q6P0N0 1132 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FBXL19Q6PCT2 694 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TMEM64Q6YI46 380 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CEP68Q76N32 757 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DOK3Q7L591 496 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM83AQ86UY5 434 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RASAL3Q86YV0 1011 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF584Q8IVC4 421 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 C7orf61Q8IZ16 206 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LINC00612Q8N6U2 182 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ANKRD52Q8NB46 1076 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SLC7A14Q8TBB6 771 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM200AQ8TCP9 573 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 EPS8L3Q8TE67 593 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZC3H15Q8WU90 426 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GCDHQ92947 438 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CUL5Q93034 780 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FOXRED1Q96CU9 486 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TRMT2BQ96GJ1 504 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 WNK4Q96J92 1243 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZFYVE19Q96K21 471 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PPP1R13BQ96KQ4 1090 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DHRS1Q96LJ7 313 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF599Q96NL3 588 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM129BQ96TA1 746 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MMP19Q99542 508 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CDX2Q99626 313 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM118BQ9BPY3 351 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CPPED1Q9BRF8 314 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MCMBPQ9BTE3 642 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 AARSD1Q9BTE6 412 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TRMT61BQ9BVS5 477 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SCRT1Q9BWW7 348 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MYLK2Q9H1R3 596 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PRDM8Q9NQV8 689 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TMEM74BQ9NUR3 256 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BTG4Q9NY30 223 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PCDHA7Q9UN72 937 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BACE2Q9Y5Z0 518 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HS3ST3B1Q9Y662 390 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 EVPLQ92817 2033 aa-0.32□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LINC00473A8K010 186 aa-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FOXN3O00409 490 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PODXLO00592 558 aa-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 EIF1AYO14602 144 aaKnown RBP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DNAJC6O75061 913 aa-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 H2AFYO75367 372 aaKnown RBP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MAFO75444 373 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DGKIO75912 1065 aa-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 JUNP05412 331 aaKnown RBP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HNRNPCP07910 306 aaKnown RBP eCLIP-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NPR3P17342 541 aa-0.33□□□□□ -2.46
RNU6-1238P-201ENST00000517215 POLR2BP30876 1174 aaKnown RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms