RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SNTG2Q9NY99 539 aa13□□□□□ -0.33
SNF8-215ENST00000515572 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
SNF8-215ENST00000515572 ANKRD63C9JTQ0 380 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 CLTAP09496 248 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 LAG3P18627 525 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 MCM4P33991 863 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 HOXD13P35453 343 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 ERVK-21P61565 698 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 POU5F1Q01860 360 aaKnown RBP12.99□□□□□ -0.33
SNF8-215ENST00000515572 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
SNF8-215ENST00000515572 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 HS2ST1Q7LGA3 356 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 THNSL1Q8IYQ7 743 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
SNF8-215ENST00000515572 CEP120Q8N960 986 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 RPS6KC1Q96S38 1066 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 GAD1Q99259 594 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 HAPLN2Q9GZV7 340 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 NUP62CLQ9H1M0 184 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 ZNF576Q9H609 170 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 AGO2Q9UKV8 859 aaKnown RBP12.99□□□□□ -0.33
SNF8-215ENST00000515572 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
SNF8-215ENST00000515572 MRPL42Q9Y6G3 142 aaKnown RBP12.99□□□□□ -0.33
SNF8-215ENST00000515572 ANK1P16157 1881 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 TGFB1I1O43294 461 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 FAM189A1O60320 539 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 RB1P06400 928 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 LINC00271P0C7V0 271 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 PTMSP20962 102 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 ADSSP30520 456 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 PPP1R2P41236 205 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 OSTNP61366 133 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 GRIK3Q13003 919 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 SPOUT1Q5T280 376 aaKnown RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 LRRC55Q6ZSA7 311 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 TRIML1Q8N9V2 468 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 CWH43Q9H720 699 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
SNF8-215ENST00000515572 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
SNF8-215ENST00000515572 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
SNF8-215ENST00000515572 TISP43B9A030 160 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 PDXKO00764 312 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 POMCP01189 267 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 CTNNB1P35222 781 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 PPM1AP35813 382 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 BMPR1AP36894 532 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
SNF8-215ENST00000515572 CAMK4Q16566 473 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 XKR4Q5GH76 650 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 CD302Q8IX05 232 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 C12orf56Q8IXR9 622 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 GPT2Q8TD30 523 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 TMEM174Q8WUU8 243 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 P2RX5Q93086 422 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 SNX27Q96L92 541 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 KCTD10Q9H3F6 313 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
SNF8-215ENST00000515572 KIAA1586Q9HCI6 787 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
SNF8-215ENST00000515572 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
SNF8-215ENST00000515572 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
SNF8-215ENST00000515572 EXTL3O43909 919 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 THP07101 528 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 CXCL8P10145 99 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 KCNE1P15382 129 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 TNFSF9P41273 254 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
SNF8-215ENST00000515572 ACOT2P49753 483 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 SCNN1GP51170 649 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 DSC1Q08554 894 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 STIM1Q13586 685 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 MYBPC2Q14324 1141 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 SEZ6Q53EL9 994 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 GPD1LQ8N335 351 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms