RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 FAM81BQ96LP2 452 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 NT5C1BQ96P26 610 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 PPANQ9NQ55 473 aaKnown RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 ZNF277Q9NRM2 450 aaPredicted RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 RAB20Q9NX57 234 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNX2-213ENST00000514949 GOLGA8IPA6NC78 632 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 GOLGA8JA6NMD2 632 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 MAFGO15525 162 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNX2-213ENST00000514949 COILP38432 576 aaPredicted RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 GCNT1Q02742 428 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 ACAD10Q6JQN1 1059 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 RNF25Q96BH1 459 aaPredicted RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 MOV10L1Q9BXT6 1211 aaKnown RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 LRRC19Q9H756 370 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 MTRF1LQ9UGC7 380 aaKnown RBP18.8■□□□□ 0.6
SNX2-213ENST00000514949 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
SNX2-213ENST00000514949 WDR81Q562E7 1941 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 ZNFX1Q9P2E3 1918 aaKnown RBP18.79■□□□□ 0.6
SNX2-213ENST00000514949 TMOD1P28289 359 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 PDE6CP51160 858 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 CDR1P51861 262 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 DENND2CQ68D51 928 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 SLC39A4Q6P5W5 647 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
SNX2-213ENST00000514949 RAPGEF5Q92565 580 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 ART4Q93070 314 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 TEPSINQ96N21 525 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 SH2D3AQ9BRG2 576 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 LRRC4CQ9HCJ2 640 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 PCDHA10Q9Y5I2 948 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 DENND3A2RUS2 1198 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 CAND2O75155 1236 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 STBD1O95210 358 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 RWDD2BP57060 319 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 CYP24A1Q07973 514 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 SLMAPQ14BN4 828 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 NBPF9Q3BBW0 867 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 TNFAIP8L3Q5GJ75 292 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 RNF207Q6ZRF8 634 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 TAS1R2Q8TE23 839 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 KCNN1Q92952 543 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 ZNF653Q96CK0 615 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 GPRASP2Q96D09 838 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
SNX2-213ENST00000514949 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
SNX2-213ENST00000514949 TMEM110-MUSTN1A8MSY1 372 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 FSCN2O14926 492 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 RARAP10276 462 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 RARGP13631 454 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 GARTP22102 1010 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 MMP13P45452 471 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 KCTD19Q17RG1 926 aaPredicted RBP18.78■□□□□ 0.6
SNX2-213ENST00000514949 ZNF568Q3ZCX4 644 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 BRDTQ58F21 947 aaPredicted RBP18.78■□□□□ 0.6
SNX2-213ENST00000514949 ERMARDQ5T6L9 678 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 KAT2BQ92831 832 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 CCDC127Q96BQ5 260 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 ACP6Q9NPH0 428 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
SNX2-213ENST00000514949 AVENQ9NQS1 362 aaPredicted RBP18.78■□□□□ 0.6
SNX2-213ENST00000514949 SPOPO43791 374 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 CTNND1O60716 968 aaKnown RBP18.77■□□□□ 0.6
SNX2-213ENST00000514949 DKC1O60832 514 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNX2-213ENST00000514949 SHBGP04278 402 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 ABCD1P33897 745 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 CLDN10P78369 228 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 PLCB4Q15147 1175 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 CLEC16AQ2KHT3 1053 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 C6orf118Q5T5N4 469 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 C15orf39Q6ZRI6 1047 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 SV2AQ7L0J3 742 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 SUGP1Q8IWZ8 645 aaKnown RBP18.77■□□□□ 0.6
SNX2-213ENST00000514949 CNPY4Q8N129 248 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 TATDN2Q93075 761 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 PLVAPQ9BX97 442 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
SNX2-213ENST00000514949 TCEAL9Q9UHQ7 104 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 ATMINO43313 823 aaPredicted RBP18.77■□□□□ 0.6
SNX2-213ENST00000514949 ZBED4O75132 1171 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 MYCLP12524 364 aaPredicted RBP18.77■□□□□ 0.6
SNX2-213ENST00000514949 ADCY2Q08462 1091 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 BSNDQ8WZ55 320 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 HOMER2Q9NSB8 354 aa18.77■□□□□ 0.6
SNX2-213ENST00000514949 PASKQ96RG2 1323 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 PARP14Q460N5 1801 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 TCRBV7S2A1N4TA0A589 114 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 AGTP01019 485 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 UNGP13051 313 aaPredicted RBP18.76■□□□□ 0.59
SNX2-213ENST00000514949 KCNA3P22001 575 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 CXCL9Q07325 125 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 SLC29A2Q14542 456 aa18.76■□□□□ 0.59
SNX2-213ENST00000514949 ARHGEF16Q5VV41 709 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms