RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 VPS16Q9H269 839 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 PLCB1Q9NQ66 1216 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 KCND1Q9NSA2 647 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-228ENST00000511676 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 UNC80Q8N2C7 3258 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 MYH11P35749 1972 aa9.92□□□□□ -0.82
NR1I3-228ENST00000511676 ESPNB1AK53 854 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TEX33O43247 280 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TLL1O43897 1013 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 EXOC3O60645 756 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MFAP3LO75121 409 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TOM1L1O75674 476 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 AFPP02771 609 aaKnown RBP9.91□□□□□ -0.82
NR1I3-228ENST00000511676 ZNF286BP0CG31 522 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 KRT13P13646 458 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 KLRC1P26715 233 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MARK3P27448 753 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 LIG4P49917 911 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 PTENP60484 403 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 ADAM17P78536 824 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 BFSP1Q12934 665 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MFSD10Q14728 455 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MAPK6Q16659 721 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 EFCAB12Q6NXP0 572 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 NME8Q8N427 588 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 ZNF397Q8NF99 534 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-228ENST00000511676 KAT2BQ92831 832 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 SLC35C1Q96A29 364 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 RAD9AQ99638 391 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 SH2D3AQ9BRG2 576 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 NKX2-4Q9H2Z4 354 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 FZD8Q9H461 694 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 PRMT7Q9NVM4 692 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-228ENST00000511676 HSPBP1Q9NZL4 362 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 CAPN11Q9UMQ6 739 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
NR1I3-228ENST00000511676 MYADML2A6NDP7 307 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 ACKR2O00590 384 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CCP110O43303 1012 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 EXTL3O43909 919 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CAND2O75155 1236 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 GYPCP04921 128 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 ALADP13716 330 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 SELPP16109 830 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 PTGS1P23219 599 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 HNRNPH3P31942 346 aaKnown RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 PSEN2P49810 448 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 ZBED6P86452 979 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CDK17Q00537 523 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CETN1Q12798 172 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CCDC85BQ15834 202 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 PTGISQ16647 500 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CNKSR3Q6P9H4 555 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 TC2NQ8N9U0 490 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 LENG1Q96BZ8 264 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 DNAJC7Q99615 494 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 INSL6Q9Y581 213 aa9.9□□□□□ -0.82
NR1I3-228ENST00000511676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
NR1I3-228ENST00000511676 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 A0A0B4J269 797 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
NR1I3-228ENST00000511676 CLIC2O15247 247 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-228ENST00000511676 PRKCBP05771 671 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
NR1I3-228ENST00000511676 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
NR1I3-228ENST00000511676 PROZP22891 400 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms