RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 PDCD4Q53EL6 469 aaKnown RBP7.14□□□□□ -1.27
NUP54-209ENST00000510569 RNF169Q8NCN4 708 aa7.14□□□□□ -1.27
NUP54-209ENST00000510569 TEX101Q9BY14 249 aa7.14□□□□□ -1.27
NUP54-209ENST00000510569 SYBUQ9NX95 663 aa7.14□□□□□ -1.27
NUP54-209ENST00000510569 ZNF185O15231 689 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 NDUFA10O95299 355 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 TGM1P22735 817 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 MRPS9P82933 396 aaKnown RBP7.13□□□□□ -1.27
NUP54-209ENST00000510569 FAM47AQ5JRC9 791 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 GJC2Q5T442 439 aaPredicted RBP7.13□□□□□ -1.27
NUP54-209ENST00000510569 SPATA31D4Q6ZUB0 917 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 ZNF572Q7Z3I7 529 aaPredicted RBP7.13□□□□□ -1.27
NUP54-209ENST00000510569 TRMT2AQ8IZ69 625 aaKnown RBP7.13□□□□□ -1.27
NUP54-209ENST00000510569 ZFP28Q8NHY6 868 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 TSPEARQ8WU66 669 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 ORAI2Q96SN7 254 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 NEU1Q99519 415 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 ADAM2Q99965 735 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 CYP4F11Q9HBI6 524 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 ANKFY1Q9P2R3 1169 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 SCOCQ9UIL1 159 aa7.13□□□□□ -1.27
NUP54-209ENST00000510569 STRN3Q13033 797 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 STRA8Q7Z7C7 330 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 OR7D4Q8NG98 312 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 COQ10AQ96MF6 247 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 WDR11Q9BZH6 1224 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 BCO1Q9HAY6 547 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 POGKQ9P215 609 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 EDARQ9UNE0 448 aa7.12□□□□□ -1.27
NUP54-209ENST00000510569 ATRNL1Q5VV63 1379 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 CXorf49A8MYA2 514 aaPredicted RBP7.11□□□□□ -1.27
NUP54-209ENST00000510569 CANXP27824 592 aaKnown RBP7.11□□□□□ -1.27
NUP54-209ENST00000510569 ADRM1Q16186 407 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 AGAP9Q5VTM2 703 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 CPEB3Q8NE35 698 aaKnown RBP7.11□□□□□ -1.27
NUP54-209ENST00000510569 GPR156Q8NFN8 814 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 SLC35B2Q8TB61 432 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 LMBR1Q8WVP7 490 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 AUTS2Q8WXX7 1259 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 RIN2Q8WYP3 895 aaPredicted RBP7.11□□□□□ -1.27
NUP54-209ENST00000510569 LINC00476Q8WZB0 136 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 CAAP1Q9H8G2 361 aa7.11□□□□□ -1.27
NUP54-209ENST00000510569 BRINP1O60477 761 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 HLA-DOAP06340 250 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 ALOX15P16050 662 aaPredicted RBP7.1□□□□□ -1.27
NUP54-209ENST00000510569 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.27
NUP54-209ENST00000510569 SOX5P35711 763 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 USP14P54578 494 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 CLRN1P58418 232 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 GUCY1B3Q02153 619 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 MUM1Q2TAK8 710 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 DPY19L2P1Q6NXN4 242 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 Q6ZVL8 140 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 KCNK18Q7Z418 384 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 AFAP1L2Q8N4X5 818 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 HOXB13Q92826 284 aaPredicted RBP7.1□□□□□ -1.27
NUP54-209ENST00000510569 SYNPO2LQ9H987 977 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 FPGT-TNNI3KV9GXZ4 949 aa7.1□□□□□ -1.27
NUP54-209ENST00000510569 PIPSLA2A3N6 862 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 DRGXA6NNA5 263 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 AKR1B10O60218 316 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 NUDT3O95989 172 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 SNRPA1P09661 255 aaKnown RBP7.09□□□□□ -1.27
NUP54-209ENST00000510569 MTHFD2P13995 350 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 TYRP1P17643 537 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 AVPR1BP47901 424 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 CHN2P52757 468 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 BLOC1S1P78537 153 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 CDK17Q00537 523 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 SP140Q13342 867 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 ANO4Q32M45 955 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 ATXN7L2Q5T6C5 722 aaPredicted RBP7.09□□□□□ -1.27
NUP54-209ENST00000510569 ARMC6Q6NXE6 501 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 OLFML1Q6UWY5 402 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 UBR7Q8N806 425 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 REPS2Q8NFH8 660 aa7.09□□□□□ -1.27
NUP54-209ENST00000510569 USP15Q9Y4E8 981 aaPredicted RBP7.09□□□□□ -1.27
NUP54-209ENST00000510569 WNT10BO00744 389 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 CFIP05156 583 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 ECHS1P30084 290 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 PTPN7P35236 360 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 RHOT2Q8IXI1 618 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 LCORLQ8N3X6 602 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 FATE1Q969F0 183 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 QRSL1Q9H0R6 528 aaKnown RBP7.08□□□□□ -1.28
NUP54-209ENST00000510569 GREM2Q9H772 168 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 IFT122Q9HBG6 1241 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 ZNHIT2Q9UHR6 403 aa7.08□□□□□ -1.28
NUP54-209ENST00000510569 EPN1Q9Y6I3 576 aaPredicted RBP7.08□□□□□ -1.28
NUP54-209ENST00000510569 TLDC2A0PJX2 215 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 ZAR1LA6NP61 321 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 SPDEFO95238 335 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 HKR1P10072 659 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 HSD3B2P26439 372 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 ADSLP30566 484 aaPredicted RBP7.07□□□□□ -1.28
NUP54-209ENST00000510569 GUCY1A2P33402 732 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 SREBF1P36956 1147 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 TP53BP2Q13625 1128 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms