RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 NLRP9Q7RTR0 991 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ARHGAP24Q8N264 748 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF398Q8TD17 642 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 ZKSCAN3Q9BRR0 538 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 CDC42EP4Q9H3Q1 356 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 TCP11L1Q9NUJ3 509 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 DDX18Q9NVP1 670 aaKnown RBP10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 HEY1Q9Y5J3 304 aa10.68□□□□□ -0.7
PDGFRA-207ENST00000509092 NDC80O14777 642 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 DDX3YO15523 660 aaKnown RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 AP1G1O43747 822 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 TCEA3O75764 348 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 CHRNA3P32297 505 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 COPB2P35606 906 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 RPL26P61254 145 aaKnown RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 ASPHQ12797 758 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 KIF22Q14807 665 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 EXOC3L4Q17RC7 722 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 DCAF12L1Q5VU92 463 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 DTHD1Q6ZMT9 781 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 MFSD6Q6ZSS7 791 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 LRRC15Q8TF66 581 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PLIN2Q99541 437 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PCYOX1Q9UHG3 505 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 NAGPAQ9UK23 515 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 TELO2Q9Y4R8 837 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PCDHA3Q9Y5H8 950 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 CCDC162PA2VCL2 907 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PP2D1A8MPX8 630 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 FOXO6A8MYZ6 492 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 GAS8O95995 478 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 KRT13P13646 458 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 RPL5P46777 297 aaKnown RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 NEK2P51955 445 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 RAP1GDS1P52306 607 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 AP2B1P63010 937 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PTK2Q05397 1052 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 KYNUQ16719 465 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF571Q7Z3V5 609 aaPredicted RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 PDSS2Q86YH6 399 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 SCYL3Q8IZE3 742 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 OR6Y1Q8NGX8 325 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 STK33Q9BYT3 514 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 CYLDQ9NQC7 956 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 FAM32AQ9Y421 112 aaKnown RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 V9GY48 417 aaPredicted RBP10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 MYPNQ86TC9 1320 aa10.67□□□□□ -0.7
PDGFRA-207ENST00000509092 TJP1Q07157 1748 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 hCG_1642624A0A1W2PR95 340 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 MATN2O00339 956 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 IPO5O00410 1097 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 PLSCR1O15162 318 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 HAUS5O94927 633 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ACSL3O95573 720 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 GSTT2P0CG29 244 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 GSTT2BP0CG30 244 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SMIM18P0DKX4 95 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ALAS1P13196 640 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 HSPA6P17066 643 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 AMPD1P23109 780 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ANXA13P27216 316 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 RELAQ04206 551 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 LPIN1Q14693 890 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ALKBH5Q6P6C2 394 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 EPM2AIP1Q7L775 607 aaPredicted RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 MTDHQ86UE4 582 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 CCDC25Q86WR0 208 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ANKRD35Q8N283 1001 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 NSL1Q96IY1 281 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ANKRD2Q9GZV1 360 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 RBM38Q9H0Z9 239 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 NAPBQ9H115 298 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 ARL8BQ9NVJ2 186 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 NENFQ9UMX5 172 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 HBS1LQ9Y450 684 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SH3PXD2BA1X283 911 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 CAPN15O75808 1086 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 GCP02774 474 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 H2AFZP0C0S5 128 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 UQCRBP14927 111 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 PLCG1P19174 1290 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 EPS15P42566 896 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 312.1 ms