RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GJB5O95377 273 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 GTF2H1P32780 548 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 IKBKEQ14164 716 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 HSP90AA2PQ14568 343 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZNF365Q70YC5 407 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CCDC34Q96HJ3 373 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 TARS2Q9BW92 718 aaKnown RBP9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM124BQ9H5Z6 455 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 SLC39A2Q9NP94 309 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 PCDHA11Q9Y5I1 949 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 B4GALT3O60512 393 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CAVIN2O95810 425 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 DEFB103AP81534 67 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 C9orf50Q5SZB4 431 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 CPB2Q96IY4 423 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZBTB45Q96K62 511 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 GBP3Q9H0R5 595 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 ASB7Q9H672 318 aa9.06□□□□□ -0.96
CDC42SE2-208ENST00000505065 TISP43B9A030 160 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 FGBP02675 491 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 CCL23P55773 120 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 MLLT1Q03111 559 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 TMEM192Q8IY95 271 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 COLGALT2Q8IYK4 626 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 UBR7Q8N806 425 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 THAP9Q9H5L6 903 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 CLTAP09496 248 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 CTSHP09668 335 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 FAM163BP0C2L3 166 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 FGFR4P22455 802 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 CYP24A1Q07973 514 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZBTB41Q5SVQ8 909 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 CBWD1Q9BRT8 395 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 PPP1R12CQ9BZL4 782 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 HSPBP1Q9NZL4 362 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 IL18RAPO95256 599 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 GCNT3O95395 438 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 SHHQ15465 462 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 HERC6Q8IVU3 1022 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 LMO3Q8TAP4 145 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 SPATA18Q8TC71 538 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZMAT2Q96NC0 199 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 ADAM2Q99965 735 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 TMEM117Q9H0C3 514 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 POLD4Q9HCU8 107 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 GOLGA6L4A6NEF3 574 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 KIF20AO95235 890 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 TDHQ8IZJ6 230 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 GPD1LQ8N335 351 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 RNF39Q9H2S5 420 aa9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 NXF3Q9H4D5 531 aaKnown RBP9.05□□□□□ -0.96
CDC42SE2-208ENST00000505065 NOTCH4Q99466 2003 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 PIRO00625 290 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 LILRB3O75022 631 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 ACTN1P12814 892 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 STX1AQ16623 288 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 MIOSQ9NXC5 875 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 MEIS3P2A8K0S8 358 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 HOXA2O43364 376 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 TBC1D4O60343 1298 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 C4BPAP04003 597 aaKnown RBP9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 NR3C1P04150 777 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 STRN3Q13033 797 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 MIIPQ5JXC2 388 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 SPATA1Q5VX52 437 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 CATSPER4Q7RTX7 472 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 NOC3LQ8WTT2 800 aaKnown RBP9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 ANAPC1Q9H1A4 1944 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 ARL5CA6NH57 179 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 CALUO43852 315 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 AKAP3O75969 853 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 AMHP03971 560 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 TYRO3Q06418 890 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 GRIK3Q13003 919 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 MAEAQ7L5Y9 396 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 EFCAB13Q8IY85 973 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 UROC1Q96N76 676 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 KIAA1549LQ6ZVL6 1849 aa9.04□□□□□ -0.96
CDC42SE2-208ENST00000505065 STAG3L1P0CL83 205 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 TNFSF9P41273 254 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 LRSAM1Q6UWE0 723 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 APBB1IPQ7Z5R6 666 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 ERCC4Q92889 916 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms